Evidence map›Paper›PMID 34919204›Full record

SynthesisPhysical and engineering sciences in medicine2022

Automated COVID-19 diagnosis and prognosis with medical imaging and who is publishing: a systematic review.

Ashley G Gillman, Febrio Lunardo, Joseph Prinable, Gregg Belous, Aaron Nicolson, Hang Min, Andrew Terhorst, Jason A Dowling

Open access · bronzeAbstract readSystematic Review
In one paragraph

Synthesis in Physical and engineering sciences in medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 10 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Ashley G GillmanAustralian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Surgical Treatment and Rehabilitation Service, 296 Herston Road, Brisbane, QLD, 4029, Australia. Ashley.Gillman@csiro.au.ORCID http://orcid.org/0000-0001-9130-1092
Febrio LunardoAustralian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Surgical Treatment and Rehabilitation Service, 296 Herston Road, Brisbane, QLD, 4029, Australia.
Joseph PrinableACRF Image X Institute, University of Sydney, Level 2, Biomedical Building (C81), 1 Central Ave, Australian Technology Park, Eveleigh, Sydney, NSW, 2015, Australia.
Gregg BelousAustralian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Surgical Treatment and Rehabilitation Service, 296 Herston Road, Brisbane, QLD, 4029, Australia.
Aaron NicolsonAustralian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Surgical Treatment and Rehabilitation Service, 296 Herston Road, Brisbane, QLD, 4029, Australia.
Hang MinAustralian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Surgical Treatment and Rehabilitation Service, 296 Herston Road, Brisbane, QLD, 4029, Australia.
Andrew TerhorstData61, Commonwealth Scientific and Industrial Research Organisation, College Road, Sandy Bay, Hobart, TAS, 7005, Australia.
Jason A DowlingAustralian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Surgical Treatment and Rehabilitation Service, 296 Herston Road, Brisbane, QLD, 4029, Australia.
Commonwealth Scientific and Industrial Research Organisation · AUThe University of Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesTo conduct a systematic survey of published techniques for automated diagnosis and prognosis of COVID-19 diseases using medical imaging, assessing the validity of reported performance and investigating the proposed clinical use-case. To conduct a scoping review into the authors publishing such work.

methodsThe Scopus database was queried and studies were screened for article type, and minimum source normalized impact per paper and citations, before manual relevance assessment and a bias assessment derived from a subset of the Checklist for Artificial Intelligence in Medical Imaging (CLAIM). The number of failures of the full CLAIM was adopted as a surrogate for risk-of-bias. Methodological and performance measurements were collected from each technique. Each study was assessed by one author. Comparisons were evaluated for significance with a two-sided independent t-test.

findingsOf 1002 studies identified, 390 remained after screening and 81 after relevance and bias exclusion. The ratio of exclusion for bias was 71%, indicative of a high level of bias in the field. The mean number of CLAIM failures per study was 8.3 ± 3.9 [1,17] (mean ± standard deviation [min,max]). 58% of methods performed diagnosis versus 31% prognosis. Of the diagnostic methods, 38% differentiated COVID-19 from healthy controls. For diagnostic techniques, area under the receiver operating curve (AUC) = 0.924 ± 0.074 [0.810,0.991] and accuracy = 91.7% ± 6.4 [79.0,99.0]. For prognostic techniques, AUC = 0.836 ± 0.126 [0.605,0.980] and accuracy = 78.4% ± 9.4 [62.5,98.0]. CLAIM failures did not correlate with performance, providing confidence that the highest results were not driven by biased papers. Deep learning techniques reported higher AUC (p < 0.05) and accuracy (p < 0.05), but no difference in CLAIM failures was identified.

interpretationA majority of papers focus on the less clinically impactful diagnosis task, contrasted with prognosis, with a significant portion performing a clinically unnecessary task of differentiating COVID-19 from healthy. Authors should consider the clinical scenario in which their work would be deployed when developing techniques. Nevertheless, studies report superb performance in a potentially impactful application. Future work is warranted in translating techniques into clinical tools.

Indexed as

COVID-19Artificial IntelligenceCOVID-19 TestingHumansPublishingRadiographySARS-CoV-2Chest X-rayComputed tomographyCoronavirusDiagnosisPrognosisStaging

Identifiers

PMID34919204
PMCPMC8678975
OpenAlexW4200211401

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.