Evidence map›Paper›PMID 34918740›Full record

ArticleDevelopment (Cambridge, England)2021

Generation and timing of graded responses to morphogen gradients.

Shari Carmon, Felix Jonas, Naama Barkai, Eyal D Schejter, Ben-Zion Shilo

Open access · hybridAbstract read
In one paragraph

Article in Development (Cambridge, England), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. bioRxiv : the preprint server for biology · 2025
    Article
  3. Article
  4. Molecular biology of the cell · 2024
    Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Shari CarmonDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel.
Felix JonasDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel.
Naama BarkaiDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel.
Eyal D SchejterDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel.ORCID 0000-0001-6093-5973
Ben-Zion ShiloDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel.ORCID 0000-0003-4903-8889
Weizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Morphogen gradients are known to subdivide a naive cell field into distinct zones of gene expression. Here, we examine whether morphogens can also induce a graded response within such domains. To this end, we explore the role of the Dorsal protein nuclear gradient along the dorsoventral axis in defining the graded pattern of actomyosin constriction that initiates gastrulation in early Drosophila embryos. Two complementary mechanisms for graded accumulation of mRNAs of crucial zygotic Dorsal target genes were identified. First, activation of target-gene expression expands over time from the ventral-most region of high nuclear Dorsal to lateral regions, where the levels are lower, as a result of a Dorsal-dependent activation probability of transcription sites. Thus, sites that are activated earlier will exhibit more mRNA accumulation. Second, once the sites are activated, the rate of RNA Polymerase II loading is also dependent on Dorsal levels. Morphological restrictions require that translation of the graded mRNA be delayed until completion of embryonic cell formation. Such timing is achieved by large introns, which provide a delay in production of the mature mRNAs. Spatio-temporal regulation of key zygotic genes therefore shapes the pattern of gastrulation.

Indexed as

AnimalsBody PatterningCell NucleusDrosophila melanogasterDrosophila ProteinsEmbryonic DevelopmentEmbryo, NonmammalianGastrulationGene Expression Regulation, DevelopmentalIntronsMorphogenesisNuclear ProteinsPhosphoproteinsRNA, MessengerRNA Polymerase IITranscription Factorsdl protein, DrosophilaDrosophila ProteinsNuclear ProteinsPhosphoproteinsRNA, MessengerRNA Polymerase IITranscription FactorsDrosophilaEmbryonic DevelopmentGastrulationMorphogenTranscription

Identifiers

PMID34918740
PMCPMC8722393
OpenAlexW4225919544

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.