Evidence map›Paper›PMID 34917980›Full record

ArticleSTAR protocols2021

Spatially resolved sampling of the human oral cavity for metabolic profiling.

Alessio Ciurli, Rico J E Derks, Maximilian Liebl, Christine Ammon, Jacques Neefjes, Martin Giera

Abstract read
In one paragraph

Article in STAR protocols, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Alessio CiurliOncode Institute and Department of Cell and Chemical Biology, Leiden University Medical Center, 2333 Leiden, ZA, the Netherlands.
Rico J E DerksCenter for Proteomics and Metabolomics, Leiden University Medical Center, 2333 Leiden, ZA, the Netherlands.
Maximilian LieblCenter for Proteomics and Metabolomics, Leiden University Medical Center, 2333 Leiden, ZA, the Netherlands.
Christine AmmonCenter for Proteomics and Metabolomics, Leiden University Medical Center, 2333 Leiden, ZA, the Netherlands.
Jacques NeefjesOncode Institute and Department of Cell and Chemical Biology, Leiden University Medical Center, 2333 Leiden, ZA, the Netherlands.
Martin GieraCenter for Proteomics and Metabolomics, Leiden University Medical Center, 2333 Leiden, ZA, the Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Here, we present a spatially resolved sampling protocol for the oral human cavity aimed at untargeted metabolomics. We describe the spatial collection of salivary biospecimens, their preparation, and subsequent mass-spectrometry-based untargeted metabolomics analysis. Our protocol avoids complex procedures generally required for gland-specific saliva collection. For the human oral cavity, we provide an easy, flexible, and reproducible solution to comprehensively map the highly heterogeneous environment and elucidate the functionality of salivary components. For complete details on the use and execution of this protocol, please refer to Ciurli et al. (2021).

Indexed as

Chromatography, LiquidHumansMass SpectrometryMetabolomeMetabolomicsMouthSalivaClinical ProtocolHealth SciencesMass SpectrometryMetabolismMetabolomics

Identifiers

PMID34917980
PMCPMC8669097

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.