Evidence map›Paper›PMID 34913861›Full record

ArticleMicrobial genomics2021

Context-aware genomic surveillance reveals hidden transmission of a carbapenemase-producing

Adrian Viehweger, Christian Blumenscheit, Norman Lippmann, Kelly L Wyres, Christian Brandt, Jörg B Hans, Martin Hölzer, Luiz Irber, Sören Gatermann, Christoph Lübbert and 3 more

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in Microbial genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Plasmid genomic epidemiology ofAntimicrobial agents and chemotherapy · 2023
    Article
  4. Article
  5. Article
  6. [Plasmids carried by carbapenems-resistantZhonghua shao shang yu chuang mian xiu fu za zhi · 2022
    Observational
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 4 countries.

Adrian ViehwegerInstitute of Medical Microbiology and Virology, University Hospital Leipzig, Leipzig, Germany.
Christian BlumenscheitZBS 6: Proteomics and Spectroscopy, Robert Koch Institute, Berlin, Germany.
Norman LippmannInstitute of Medical Microbiology and Virology, University Hospital Leipzig, Leipzig, Germany.
Kelly L WyresDepartment of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Australia.
Christian BrandtInstitute for Infectious Diseases and Infection Control, Jena University Hospital, Jena, Germany.
Jörg B HansNational Reference Center for multidrug-resistant Gram-negative bacteria, Department for Medical Microbiology, Ruhr-University Bochum, Bochum, Germany.
Martin HölzerMethodology and Research Infrastructure, MF1 Bioinformatics, Robert Koch Institute, Berlin, Germany.
Luiz IrberDepartment of Population Health and Reproduction, University of California, Davis, Davis, California, USA.
Sören GatermannNational Reference Center for multidrug-resistant Gram-negative bacteria, Department for Medical Microbiology, Ruhr-University Bochum, Bochum, Germany.
Christoph LübbertDivision of Infectious Diseases and Tropical Medicine, Department of Medicine II, University Hospital Leipzig, Leipzig, Germany.
Mathias W PletzInstitute for Infectious Diseases and Infection Control, Jena University Hospital, Jena, Germany.
Kathryn E HoltDepartment of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Australia.
Brigitte KönigInstitute of Medical Microbiology and Virology, University Hospital Leipzig, Leipzig, Germany.
University Hospital Leipzig · DEJena University Hospital · DERobert Koch Institute · DERuhr University Bochum · DELondon School of Hygiene & Tropical Medicine · GBMonash University · AUUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genomic surveillance can inform effective public health responses to pathogen outbreaks. However, integration of non-local data is rarely done. We investigate two large hospital outbreaks of a carbapenemase-carrying

Indexed as

Drug Resistance, BacterialBacterial ProteinsColistinCross InfectionDisease OutbreaksEpidemiological MonitoringGermanyHumansKlebsiella InfectionsKlebsiella pneumoniaeMembrane Transport ProteinsModels, MolecularPhylogenyProtein ConformationBacterial ProteinsColistinMembrane Transport Proteinsantimicrobial resistancecolistingenomic surveillanceKPCmeta-analysisplasmids

Identifiers

PMID34913861
PMCPMC8767333
OpenAlexW4225999358

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.