ArticleBreeding science2021
RAD-R scripts: R pipeline for RAD-seq from FASTQ files to linkage maps construction and run R/QTL, operating only at copying and pasting scripts into R console.
Article in Breeding science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
3 citing papers in PubMed, 7 citations in OpenAlex.
- LsMybW-encoding R2R3-MYB transcription factor is responsible for a shift from black to white in lettuce seed.Plant cell reports · 2024Article
- Detection of candidate gene LsACOS5 and development of InDel marker for male sterility by ddRAD-seq and resequencing analysis in lettuce.Scientific reports · 2022Article
- QTL mapping for seed morphology using the instance segmentation neural network inFrontiers in plant science · 2022Article
Corrections and comments
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Authors and funding
1 author.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Coupled with the reduction in sequencing costs, the number of RAD-seq analysis have been surging, generating vast genetic knowledge in relation with many crops. Specialized platforms might be intimidating to non-expert users and difficult to implement on each computer despite the growing interest in the usage of the dataset obtained by high-throughput sequencing. Therefore, RAD-R scripts were developed on Windows10 for RAD-seq analysis, allowing users who are not familiar with bioinformatics to easily analyze big sequence data. These RAD-R scripts that run a flow from raw sequence reads of F
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.