Evidence map›Paper›PMID 34911854›Full record

ArticleZhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences2021

Change of gene expression profiles in human cardiomyocytes and macrophages infected with SARS

Yumeng Yang, Shaowei Wang, Xinyi Xie, Junjie Li, Rongqiang Zhang

Open access · greenAbstract read
In one paragraph

Article in Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 55% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yumeng YangSecond Clinical School of Shaanxi University of Chinese Medicine, Xianyang Shaanxi 712046. 2518177708@qq.com.
Shaowei WangSecond Clinical School of Shaanxi University of Chinese Medicine, Xianyang Shaanxi 712046. 1391140691@qq.com.
Xinyi XieSecond Clinical School of Shaanxi University of Chinese Medicine, Xianyang Shaanxi 712046.
Junjie LiSecond Clinical School of Shaanxi University of Chinese Medicine, Xianyang Shaanxi 712046.
Rongqiang ZhangSchool of Public Health, Shaanxi University of Chinese Medicine, Xianyang Shaanxi 712046, China. zhangrqxianyang@163.com.
Shaanxi University of Chinese Medicine · CN

Funding

the Innovation Training Program for College Students S202010716009the Subject Innovation Team of Shaanxi University of Chinese Medicine 132041933
6 · The paper itself

Abstract

objectivesCoronavirus disease 2019 (COVID-19) is an acute respiratory infectious disease caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). SARS-CoV-2 can damage the myocardium directly, or activate the immune system, trigger a cytokine storm, and cause inflammatory cells to infiltrate the myocardial tissue and damage the myocardium. This study is based on the sequencing data to analyze the changes in gene expression of cardiomyocytes and macrophages after SARS-CoV-2 infection, and explore the potential effects of SARS-CoV-2 on the heart and immune system.

methodsThe public data set GSE151879 was retrieved. The online software Network Analyst was used to preprocess the data, and the differentially expressed genes (DEGs) [log

resultsAfter data standardization, the data quality was excellent and it can ensure reliable results. Myocardial cell infection with SARS-CoV-2 and gene expression spectrum were changed significantly, including a total of 484 DEGs in adult cardiomyoblasts, a total of 667 DEGs in macrophages, and a total of 1 483 DEGs in human embryo source of cardiomyopathy. The Stum, mechanosensory transduction mediator homolog (STUM), dehydrogenase/reductase 9 (DHRS9), calcium/calmodulin dependent protein kinase II beta (CAMK2B), claudin 1(CLDN1), C-C motif chemokine ligand 2 (CCL2), TNFAIP3 interacting protein 3 (TNIP3), G protein-coupled receptor 84 (GPR84), and C-X-C motif chemokine ligand 1 (CXCL1) were identical in expression patterns in 3 types of cells. The protein-protein interaction suggested that CAMK2B proteins may play a key role in the antiviral process in 3 types of cells; and silicon dioxide (SiO

conclusionsCAMK2B, CLDN1, CCL2, and DHRS9 genes play important roles in the immune response of cardiomyocytes against SARS-CoV-2. SiO

Indexed as

COVID-19SARS-CoV-2HumansMacrophagesMyocytes, CardiacSilicon DioxideTranscriptomeSilicon Dioxidecardiomyocytescoronavirus disease 2019environmental chemicalsimmune responsemacrophagessevere acute respiratory syndrome coronavirus 2

Identifiers

PMID34911854
PMCPMC10929859
OpenAlexW4200443049

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.