Evidence map›Paper›PMID 34911816›Full record

ArticleJournal of medical genetics2022

Constitutional chromothripsis of the

Florentine Scharf, Rafaela Magalhaes Leal Silva, Monika Morak, Alex Hastie, Julia M A Pickl, Kai Sendelbach, Christian Gebhard, Melanie Locher, Andreas Laner, Verena Steinke-Lange and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of medical genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Micronuclei: origins, assays, mechanisms, diseases and treatments.Signal transduction and targeted therapy · 2026
    Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Update on Surgical Management of FAP.Clinics in colon and rectal surgery · 2023
    Review
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Florentine ScharfMGZ - Medizinisch Genetisches Zentrum, Munich, Germany.ORCID 0000-0002-3848-312X
Rafaela Magalhaes Leal SilvaMGZ - Medizinisch Genetisches Zentrum, Munich, Germany.ORCID 0000-0002-0062-1865
Monika MorakMGZ - Medizinisch Genetisches Zentrum, Munich, Germany.
Alex HastieBioNano Genomics Inc, San Diego, California, USA.
Julia M A PicklMGZ - Medizinisch Genetisches Zentrum, Munich, Germany.
Kai SendelbachMGZ - Medizinisch Genetisches Zentrum, Munich, Germany.
Christian GebhardMGZ - Medizinisch Genetisches Zentrum, Munich, Germany.ORCID 0000-0002-8792-565X
Melanie LocherMGZ - Medizinisch Genetisches Zentrum, Munich, Germany.
Andreas LanerMGZ - Medizinisch Genetisches Zentrum, Munich, Germany.
Verena Steinke-LangeMGZ - Medizinisch Genetisches Zentrum, Munich, Germany.
Udo KoehlerMGZ - Medizinisch Genetisches Zentrum, Munich, Germany.
Elke Holinski-FederMGZ - Medizinisch Genetisches Zentrum, Munich, Germany dieter.wolf@mgz-muenchen.de elke.holinski-feder@mgz-muenchen.de.
Dieter A WolfMGZ - Medizinisch Genetisches Zentrum, Munich, Germany dieter.wolf@mgz-muenchen.de elke.holinski-feder@mgz-muenchen.de.ORCID 0000-0002-3761-1070
Medical Genetics Center · DEBioNano Genomics (United States) · USLMU Klinikum · DETUM Klinikum · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeApproximately 20% of patients with clinical familial adenomatous polyposis (FAP) remain unsolved after molecular genetic analysis of the

methodsWe applied multidimensional genomic analysis employing chromosomal microarray profiling, optical mapping, long-read genome and RNA sequencing combined with FISH and standard PCR of genomic and complementary DNA to decode a patient with an attenuated FAP that had remained unsolved by Sanger sequencing and multigene panel next-generation sequencing for years.

resultsWe identified a complex 3.9 Mb rearrangement involving 14 fragments from chromosome 5q22.1q22.3 of which three were lost, 1 reinserted into chromosome 5 and 10 inserted into chromosome 10q21.3 in a seemingly random order and orientation thus fulfilling the major criteria of chromothripsis. The rearrangement separates

conclusionsBased on comprehensive genomic analysis, we propose that constitutional chromothripsis dampening

Indexed as

Adenomatous Polyposis ColiChromothripsisColonic NeoplasmsAdenomatous Polyposis Coli ProteinAxin Proteinbeta CateninDNA, ComplementaryGenes, APCGenetic Predisposition to DiseaseHumansRNA, MessengerAdenomatous Polyposis Coli ProteinAxin Proteinbeta CateninDNA, ComplementaryRNA, Messengergastrointestinal diseasesgene expression profilinggene rearrangementgeneticsgenomicsmedical

Identifiers

PMID34911816
PMCPMC9554066
OpenAlexW4200340852

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.