Evidence map›Paper›PMID 34910983›Full record

ArticleJournal of virological methods2022

Evaluation of two RT-PCR techniques for SARS-CoV-2 RNA detection in serum for microbiological diagnosis.

Alexandra Martín Ramírez, Nelly Daniela Zurita Cruz, Ainhoa Gutiérrez-Cobos, Diego Aníbal Rodríguez Serrano, Isidoro González Álvaro, Emilia Roy Vallejo, Sara Gómez de Frutos, Leticia Fontán García-Rodrigo, Laura Cardeñoso Domingo

Open access · greenAbstract read
In one paragraph

Article in Journal of virological methods, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. The kinetics of SARS-CoV-2 viremia in COVID-19 patients receiving remdesivir.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2023
    Observational
  5. Observational
  6. Usefulness of real-time RT-PCR to understand the kinetics of SARS-CoV-2 in blood: A prospective study.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2022
    Observational
  7. Article
  8. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Alexandra Martín RamírezClinical Microbiology Department, La Princesa University Hospital, Madrid, Spain.
Nelly Daniela Zurita CruzClinical Microbiology Department, La Princesa University Hospital, Madrid, Spain.
Ainhoa Gutiérrez-CobosClinical Microbiology Department, La Princesa University Hospital, Madrid, Spain. Electronic address: ainhoagutierrezcobos@gmail.com.
Diego Aníbal Rodríguez SerranoIntesive Care Department, La Princesa University Hospital, Madrid, Spain.
Isidoro González ÁlvaroRheumatology Department, La Princesa University Hospital, Madrid, Spain.
Emilia Roy VallejoInternal Medicine Department, La Princesa University Hospital, Madrid, Spain.
Sara Gómez de FrutosClinical Microbiology Department, La Princesa University Hospital, Madrid, Spain.
Leticia Fontán García-RodrigoClinical Microbiology Department, La Princesa University Hospital, Madrid, Spain.
Laura Cardeñoso DomingoClinical Microbiology Department, La Princesa University Hospital, Madrid, Spain.
Hospital Universitario de La Princesa · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Presence of SARS-CoV-2 RNA in serum (viremia) of COVID-19 patients has been related to poor prognosis and death. The aim of this study was to evaluate both the ability to detect viremia in COVID-19 patients of two commercial reverse real-time-PCR (rRT-PCR) tests, Cobas® and TaqPath™, comparing them with a gold standard method, and their implementation in microbiology laboratories. This retrospective cohort study included 303 adult patients (203 diagnosed with COVID-19 and 100 non-COVID-19 patients) admitted to a tertiary hospital, with at least one serum sample collected within the first 48 h from admission. A total of 365 serum samples were included: 100 from non-COVID patients (pre-pandemic and pandemic control groups) and 265 from COVID-19 patients. Serum samples were considered positive when at least one target was detected. All patients in control groups showed negative viremia. Cobas® and TaqPath™ tests showed specificity and Positive Predictive Value over 96%. Nevertheless, sensitivity (53.72 and 73.63, respectively) and Negative Predictive Value (64.78 and 75) were lower. Viremia difference between ICU and non-ICU patients was significant (p ≤ 0.001) for both techniques. Consequently, SARS-CoV-2 viremia detection by both rRT-PCR tests should be considered a good tool to stratify COVID-19 patients and could be implemented in microbiology laboratories.

Indexed as

COVID-19SARS-CoV-2AdultHumansRetrospective StudiesReverse Transcriptase Polymerase Chain ReactionRNA, ViralSensitivity and SpecificityRNA, ViralCOVID-19RNArRT-PCRSARS-CoV-2Serum

Identifiers

PMID34910983
PMCPMC8666146
OpenAlexW4225667801

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.