Evidence map›Paper›PMID 34910778›Full record

ArticlePloS one2021

Divergent evolution of Corynebacterium diphtheriae in India: An update from National Diphtheria Surveillance network.

Naveen Kumar Devanga Ragupathi, Dhiviya Prabaa Muthuirulandi Sethuvel, Dhivya Murugan, Ranjini Ranjan, Vikas Gautam, Prashanth Gupta, Jaichand Johnson, Naresh Chand Sharma, Ankur Mutreja, Pradeep Haldar and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 88% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Naveen Kumar Devanga RagupathiDepartment of Clinical Microbiology, Christian Medical College, Vellore, India.ORCID 0000-0001-8667-7132
Dhiviya Prabaa Muthuirulandi SethuvelDepartment of Clinical Microbiology, Christian Medical College, Vellore, India.
Dhivya MuruganDepartment of Clinical Microbiology, Christian Medical College, Vellore, India.
Ranjini RanjanDepartment of Clinical Microbiology, Christian Medical College, Vellore, India.
Vikas GautamDepartment of Medical Microbiology, Postgraduate Institute of Medical Education & Research, Chandigarh, India.ORCID 0000-0001-5565-048X
Prashanth GuptaKing George's Medical University, Lucknow, Uttar Pradesh, India.ORCID 0000-0002-6925-3546
Jaichand JohnsonState Public Health Laboratory, Thiruvananthapuram, India.
Naresh Chand SharmaMaharishi Valmiki Infectious Diseases Hospital, New Delhi, India.ORCID 0000-0002-7024-7039
Ankur MutrejaDepartment of Medicine, Addenbrookes Hospital, University of Cambridge, Cambridge, United Kingdom.
Pradeep HaldarMinistry of Health and Family Welfare, Government of India, New Delhi, India.ORCID 0000-0002-7654-9396
Arun KumarWorld Health Organization, New Delhi, India.ORCID 0000-0002-4843-1585
Pankaj BhatnagarWorld Health Organization, New Delhi, India.ORCID 0000-0003-4551-4577
Lucky SangalWorld Health Organization, New Delhi, India.
Balaji VeeraraghavanDepartment of Clinical Microbiology, Christian Medical College, Vellore, India.ORCID 0000-0002-8662-4257
Christian Medical College, Vellore · INWorld Health Organization - India · INGovernment of India · INKing George's Medical University · INPost Graduate Institute of Medical Education and Research · INUniversity of Cambridge · GB

Funding

World Health Organization 001
6 · The paper itself

Abstract

Diphtheria is caused by a toxigenic bacterium Corynebacterium diphtheria which is being an emerging pathogen in India. Since diphtheria morbidity and mortality continues to be high in the country, the present study aimed to study the molecular epidemiology of C. diphtheriae strains from India. A total of 441 diphtheria suspected specimens collected as part of the surveillance programme between 2015 and 2020 were studied. All the isolates were confirmed as C. diphtheriae with standard biochemical tests, ELEK's test, and real-time PCR. Antimicrobial susceptibility testing for the subset of isolates showed intermediate susceptibility to penicillin and complete susceptible to erythromycin and cefotaxime. Isolates were characterized using multi locus sequence typing method. MLST analysis for the 216 C. diphtheriae isolates revealed major diversity among the sequence types. A total of 34 STs were assigned with majority of the isolates belonged to ST466 (30%). The second most common ST identified was ST405 that was present in 14% of the isolates. The international clone ST50 was also seen. The identified STs were grouped into 8 different clonal complexes (CC). The majority belongs to CC5 followed by CC466, CC574 and CC209, however a single non-toxigenic strain belongs to CC42. This epidemiological analysis revealed the emergence of novel STs and the clones with better dissemination properties. This study has also provided information on the circulating strains of C. diphtheriae among the different regions of India. The molecular data generated through surveillance system can be utilized for further actions in concern.

Indexed as

Epidemiological MonitoringAnti-Bacterial AgentsCefotaximeCorynebacterium diphtheriaeDiphtheriaErythromycinHumansIndiaMicrobial Sensitivity TestsMolecular EpidemiologyMultilocus Sequence TypingPenicillinsAnti-Bacterial AgentsCefotaximeErythromycinPenicillins

Identifiers

PMID34910778
PMCPMC8673651
OpenAlexW4200372789

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.