Evidence map›Paper›PMID 34910765›Full record

ArticlePloS one2021

Differential expression of miRNAs involved in biological processes responsible for inflammation and immune response in lichen sclerosus urethral stricture disease.

Harjivan Kohli, Brandon Childs, Travis B Sullivan, Artem Shevtsov, Eric Burks, Thomas Kalantzakos, Kimberly Rieger-Christ, Alex J Vanni

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 6 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Harjivan KohliDepartment of Urology, Lahey Hospital & Medical Center, Burlington, Massachusetts, United States of America.ORCID 0000-0003-4022-5741
Brandon ChildsDepartment of Urology, Lahey Hospital & Medical Center, Burlington, Massachusetts, United States of America.
Travis B SullivanDepartment of Translational Research, Lahey Hospital & Medical Center, Burlington, Massachusetts, United States of America.ORCID 0000-0002-3395-0294
Artem ShevtsovDepartment of Pathology, Boston University School of Medicine, Boston, Massachusetts, United States of America.ORCID 0000-0003-1003-6616
Eric BurksDepartment of Pathology, Boston University School of Medicine, Boston, Massachusetts, United States of America.ORCID 0000-0002-3122-2875
Thomas KalantzakosDepartment of Translational Research, Lahey Hospital & Medical Center, Burlington, Massachusetts, United States of America.
Kimberly Rieger-ChristDepartment of Urology, Lahey Hospital & Medical Center, Burlington, Massachusetts, United States of America.
Alex J VanniDepartment of Urology, Lahey Hospital & Medical Center, Burlington, Massachusetts, United States of America.ORCID 0000-0002-0755-0094
Lahey Medical Center · USBoston University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeTo better understand the pathophysiology of lichen sclerosus (LS) urethral stricture disease (USD), we aimed to investigate expression profiles of microRNAs (miRNAs) in tissue samples from men undergoing urethroplasty.

methodsUrethral stricture tissue was collected from 2005-2020. Histologic features diagnostic of LS were the basis of pathologic evaluation. Foci of areas diagnostic for LS or non-LS strictures were chosen for RNA evaluation. In an initial screening analysis, 13 LS urethral strictures and 13 non-LS strictures were profiled via miRNA RT-qPCR arrays for 752 unique miRNA. A validation analysis of 23 additional samples (9 LS and 14 non-LS) was performed for 15 miRNAs. Statistical analyses were performed using SPSS v25. Gene Ontology (GO) analysis was performed using DIANA-mirPath v. 3.0.

resultsIn the screening analysis 143 miRNAs were detected for all samples. 27 were differentially expressed between the groups (false discovery p-value <0.01). 15 of these miRNAs individually demonstrated an area under the curve (AUC)>0.90 for distinguishing between between LS and non-LS strictures. 11-fold upregulation of MiR-155-5p specifically was found in LS vs. non-LS strictures (p<0.001, AUC = 1.0). In the validation analysis, 13 of the 15 miRNAs tested were confirmed to have differential expression (false discovery p-value <0.10).

conclusionsTo our knowledge this is the first study evaluating miRNA expression profiles in LS and non-LS USD. We identified several miRNAs that are differentially expressed in USD caused by LS vs other etiologies, which could potentially serve as biomarkers of LS USD. The top eight differentially expressed miRNAs have been linked to immune response processes as well as involvement in wound healing, primarily angiogenesis and fibrosis.

Indexed as

AdultAgedAged, 80 and overGene Expression ProfilingGenetic MarkersHumansInflammationLichen Sclerosus et AtrophicusMaleMicroRNAsMiddle AgedRetrospective StudiesUrethraUrethral StrictureUrologic Surgical Procedures, MaleGenetic MarkersMicroRNAs

Identifiers

PMID34910765
PMCPMC8673646
OpenAlexW4200307348

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.