Evidence map›Paper›PMID 34910726›Full record

ArticlePLoS genetics2021

ENAP1 retrains seed germination via H3K9 acetylation mediated positive feedback regulation of ABI5.

Bo Zhao, Likai Wang, Zhengyao Shao, Kevin Chin, Daveraj Chakravarty, Hong Qiao

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. How chromatin senses plant hormones.Current opinion in plant biology · 2024
    Review
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Bo ZhaoDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, United States of America.ORCID 0000-0002-3016-4749
Likai WangDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, United States of America.ORCID 0000-0001-8858-794X
Zhengyao ShaoDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, United States of America.ORCID 0000-0003-2965-8335
Kevin ChinDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, United States of America.ORCID 0000-0001-5132-4425
Daveraj ChakravartyDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, United States of America.ORCID 0000-0002-7629-8873
Hong QiaoDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, United States of America.ORCID 0000-0003-3359-1962
The University of Texas at Austin · US

Funding

Molecular mechanisms of interplay between ethylene signaling and chromatin regulation in ArabidopsisR01GM115879 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI QIAO, HONG · 2015 to 2023
$2.9M
NIGMS NIH HHS R01 GM115879
6 · The paper itself

Abstract

Histone acetylation is involved in the regulation of seed germination. The transcription factor ABI5 plays an essential role in ABA- inhibited seed germination. However, the molecular mechanism of how ABI5 and histone acetylation coordinate to regulate gene expression during seed germination is still ambiguous. Here, we show that ENAP1 interacts with ABI5 and they co-bind to ABA responsive genes including ABI5 itself. The hypersensitivity to ABA of ENAP1ox seeds germination is recovered by the abi5 null mutation. ABA enhances H3K9Ac enrichment in the promoter regions as well as the transcription of target genes co-bound by ENAP1 and ABI5, which requires both ENAP1 and ABI5. ABI5 gene is directly regulated by ENAP1 and ABI5. In the enap1 deficient mutant, H3K9Ac enrichment and the binding activity of ABI5 in its own promoter region, along with ABI5 transcription and protein levels are all reduced; while in the abi5-1 mutant, the H3K9Ac enrichment and ENAP1 binding activity in ABI5 promoter are decreased, suggesting that ENAP1 and ABI5 function together to regulate ABI5- mediated positive feedback regulation. Overall, our research reveals a new molecular mechanism by which ENAP1 regulates H3K9 acetylation and mediates the positive feedback regulation of ABI5 to inhibit seed germination.

Indexed as

Abscisic AcidAcetylationArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsFeedback, PhysiologicalGene Expression Regulation, PlantGerminationPlant Growth RegulatorsProtein Processing, Post-TranslationalSeedsSignal TransductionTranscription FactorsABI5 protein, ArabidopsisAbscisic AcidArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsPlant Growth RegulatorsTranscription FactorsVFP3 protein, Arabidopsis

Identifiers

PMID34910726
PMCPMC8673607
OpenAlexW4200250028

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.