Evidence map›Paper›PMID 34910503›Full record

ArticleScience advances2021

Single-synapse analyses of Alzheimer's disease implicate pathologic tau, DJ1, CD47, and ApoE.

Thanaphong Phongpreecha, Chandresh R Gajera, Candace C Liu, Kausalia Vijayaragavan, Alan L Chang, Martin Becker, Ramin Fallahzadeh, Rosemary Fernandez, Nadia Postupna, Emily Sherfield and 13 more

Abstract read
In one paragraph

Article in Science advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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  14. Single-cell spatial proteomic imaging for human neuropathology.Acta neuropathologica communications · 2022
    Article
  15. Review
  16. Vesicular Glutamate Release from Feeder-FreehiPSC-Derived Neurons.International journal of molecular sciences · 2022
    Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Thanaphong PhongpreechaDepartment of Pathology, Stanford University, Stanford, CA, USA.ORCID 0000-0001-9245-6686
Chandresh R GajeraDepartment of Pathology, Stanford University, Stanford, CA, USA.ORCID 0000-0002-4638-2097
Candace C LiuDepartment of Pathology, Stanford University, Stanford, CA, USA.ORCID 0000-0002-2446-2264
Kausalia VijayaragavanDepartment of Pathology, Stanford University, Stanford, CA, USA.ORCID 0000-0002-9830-5704
Alan L ChangDepartment of Anesthesiology, Perioperative, and Pain Medicine, Stanford University, Stanford, CA, USA.ORCID 0000-0003-1716-0134
Martin BeckerDepartment of Anesthesiology, Perioperative, and Pain Medicine, Stanford University, Stanford, CA, USA.ORCID 0000-0003-4296-3481
Ramin FallahzadehDepartment of Anesthesiology, Perioperative, and Pain Medicine, Stanford University, Stanford, CA, USA.ORCID 0000-0001-9966-850X
Rosemary FernandezDepartment of Pathology, Stanford University, Stanford, CA, USA.ORCID 0000-0002-3378-0109
Nadia PostupnaDepartment of Pathology, University of Washington, Seattle, WA, USA.ORCID 0000-0002-4939-4915
Emily SherfieldDepartment of Pathology, University of Washington, Seattle, WA, USA.
Dmitry TebaykinDepartment of Pathology, Stanford University, Stanford, CA, USA.ORCID 0000-0003-0913-8834
Caitlin LatimerDepartment of Pathology, University of Washington, Seattle, WA, USA.ORCID 0000-0003-3727-4278
Carol A ShivelyDepartment of Pathology/Comparative Medicine, Wake Forest School of Medicine, Winston-Salem, NC, USA.ORCID 0000-0002-1536-2288
Thomas C RegisterDepartment of Pathology/Comparative Medicine, Wake Forest School of Medicine, Winston-Salem, NC, USA.ORCID 0000-0002-4078-0166
Suzanne CraftDepartment of Internal Medicine-Geriatrics, Wake Forest School of Medicine, Winston-Salem, NC, USA.
Kathleen S MontineDepartment of Pathology, Stanford University, Stanford, CA, USA.
Edward J FoxDepartment of Pathology, Stanford University, Stanford, CA, USA.
Kathleen L PostonDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA.ORCID 0000-0003-3424-7143
C Dirk KeeneDepartment of Pathology, University of Washington, Seattle, WA, USA.ORCID 0000-0002-5291-1469
Michael AngeloDepartment of Pathology, Stanford University, Stanford, CA, USA.ORCID 0000-0003-1531-5067
Sean C BendallDepartment of Pathology, Stanford University, Stanford, CA, USA.ORCID 0000-0003-1341-2453
Nima AghaeepourDepartment of Anesthesiology, Perioperative, and Pain Medicine, Stanford University, Stanford, CA, USA.ORCID 0000-0002-6117-8764
Thomas J MontineDepartment of Pathology, Stanford University, Stanford, CA, USA.ORCID 0000-0002-1346-2728

Funding

University of Washington Alzheimer's Disease Research CenterP30AG066509 · NIA · UNIVERSITY OF WASHINGTON · PI Thomas J. Grabowski · 2020 to 2026
$29.0M
Stanford Alzheimer's Disease Research CenterAdmin Supp: Developing iPSC models for AD and PDP30AG066515 · NIA · STANFORD UNIVERSITY · PI ELIZABETH MORMINO · 2020 to 2026
$29.0M
Wake Forest University School of Medicine Alzheimer's Disease Research CenterP30AG072947 · NIA · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI SUZANNE CRAFT · 2021 to 2026
$24.3M
Udall Center Director's meeting poster awardP50NS062684 · NINDS · UNIVERSITY OF WASHINGTON · PI MONTINE, THOMAS J · 2009 to 2020
$18.3M
Wake Forest Alzheimer's Disease Core CenterP30AG049638 · NIA · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI ESPELAND, MARK ANDREW · 2016 to 2020
$12.2M
Dietary Mitigation of Psychosocial Stress Effects on CVD Risk R01HL087103 · NHLBI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI SHIVELY, CAROL A. · 2007 to 2017
$6.0M
Development of an Innovative Vervet (Chlorocebus aethiops sabaeus) Model of Early Alzheimer's-like Neuropathology and SymptomatologyR24AG073199 · NIA · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI CRAFT, SUZANNE, SHIVELY, CAROL A. · 2021 to 2024
$5.6M
MIRIAD - Multiplexed Imaging of Resilience In Alzheimers DiseaseR01AG057915 · NIA · STANFORD UNIVERSITY · PI ANGELO, ROBERT MICHAEL, BENDALL, SEAN CURTIS · 2017 to 2021
$4.5M
Neuropathologic substrates for motor and cognitive impairment in three existing cohort studies of Alzheimer's disease and related dementiasUF1AG057707 · NIA · STANFORD UNIVERSITY · PI MONTINE, THOMAS J, WHITE, LON RAY · 2017 to 2017
$3.9M
Deciphering the Glycan Code in Human Alzheimer’s Disease BrainR01AG078702 · NIA · UNIVERSITY OF KENTUCKY · PI Peggi M Angel, Sean Curtis Bendall · 2022 to 2026
$3.8M
Effects of Western and Mediterranean Diets on Metabolic and Neuropathologic Risk Factors for Alzheimer's Disease in Nonhuman PrimatesRF1AG058829 · NIA · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI CRAFT, SUZANNE, SHIVELY, CAROL A. · 2018 to 2018
$2.8M
The Phenotypic Landscape of Cognitive Decline as Revealed by Next-Generation Multiplexed Ion Beam ImagingR01AG056287 · NIA · STANFORD UNIVERSITY · PI ANGELO, ROBERT MICHAEL, BENDALL, SEAN CURTIS · 2017 to 2021
$2.6M
NHLBI NIH HHS R01 HL087103NHLBI NIH HHS R01 HL122393NIA NIH HHS L30 AG074138NIA NIH HHS P30 AG049638NIA NIH HHS P30 AG066509NIA NIH HHS P30 AG066515NIA NIH HHS P30 AG072947NIA NIH HHS R01 AG056287NIA NIH HHS R01 AG057915NIA NIH HHS R01 AG068279NIA NIH HHS R01 AG078702NIA NIH HHS R24 AG073199NIA NIH HHS RF1 AG058829NIA NIH HHS UF1 AG057707NIGMS NIH HHS R35 GM138353NINDS NIH HHS P50 NS062684
6 · The paper itself

Abstract

Synaptic molecular characterization is limited for Alzheimer’s disease (AD). Our newly invented mass cytometry–based method, synaptometry by time of flight (SynTOF), was used to measure 38 antibody probes in approximately 17 million single-synapse events from human brains without pathologic change or with pure AD or Lewy body disease (LBD), nonhuman primates (NHPs), and PS/APP mice. Synaptic molecular integrity in humans and NHP was similar. Although not detected in human synapses, Aβ was in PS/APP mice single-synapse events. Clustering and pattern identification of human synapses showed expected disease-specific differences, like increased hippocampal pathologic tau in AD and reduced caudate dopamine transporter in LBD, and revealed previously unidentified findings including increased hippocampal CD47 and lowered DJ1 in AD and higher ApoE in AD with dementia. Our results were independently supported by multiplex ion beam imaging of intact tissue. This highlights the higher depth and breadth of insight on neurodegenerative diseases obtainable through SynTOF.

Identifiers

PMID34910503
PMCPMC8673771

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