Evidence map›Paper›PMID 34910270›Full record

ArticleRice (New York, N.Y.)2021

Integrative QTL Identification, Fine Mapping and Candidate Gene Analysis of a Major Locus qLTG3a for Seed Low-Temperature Germinability in Rice.

Zhaoyuan Pan, Bin Tan, Guiyuan Cao, Rongqi Zheng, Meng Liu, Ruizhen Zeng, Shaokui Wang, Haitao Zhu, Heng Ye, Guangmiao Zhao and 4 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Rice (New York, N.Y.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Cold tolerance SNPs and candidate gene mining in the soybean germination stage based on genome-wide association analysis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  4. The Next Generation of Rice: Inter-SubspecificFrontiers in plant science · 2022
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 2 countries.

Zhaoyuan Pan *Guangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China.
Bin Tan *Guangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China.
Guiyuan CaoGuangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China.
Rongqi ZhengGuangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China.
Meng LiuGuangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China.
Ruizhen ZengGuangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China.
Shaokui WangGuangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China.
Haitao ZhuGuangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China.
Heng YeDivision of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA.
Guangmiao ZhaoGuangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China.
Wei CaoGuangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China.
Guifu LiuGuangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China.
Guiquan ZhangGuangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China. gqzhang@scau.edu.cn.
Yuliang ZhouGuangdong Key Laboratory of Plant Molecular Breeding and State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China. zhouyuliang@scau.edu.cn.ORCID http://orcid.org/0000-0002-9211-6064
South China Agricultural University · CNUniversity of Missouri · US

Funding

National Natural Science Foundation of China 31301403National Natural Science Foundation of China 31622041National Natural Science Foundation of China 31771888Natural Science Foundation of Guangdong Province 2017A030310271Natural Science Foundation of Guangdong Province S2013040014992Specialized Research Fund for the Doctoral Program of Higher Education of China 20134404120012
6 · The paper itself

Abstract

Low-temperature germinability (LTG) is an important agronomic trait that can affect the planting time, planting area, and grain yield of staple crops, such as rice. However, the genetic mechanism of LTG is still unclear. In this study, a multi-parental permanent population with 208 single segment substitution lines (SSSLs) was used to conduct a genetic dissection for LTG across four cropping seasons. LTG was a typical quantitative trait with a high combined broad-sense heritability of 0.71. By comparison with the recipient parent, Huajingxian74, 24 SSSLs were identified as carrying LTG QTLs, which were further merged into integrated QTLs with shorter genetic distances by substitution mapping. Finally, 14 LTG QTLs were mapped on ten chromosomes, including seven positive-effect and seven negative-effect QTLs, with additive effect contributions ranging from 19.2 to 39.9%. qLTG3a, a main-effect and novel QTL, was confirmed by bulk segregant analysis using an F

Indexed as

Bulk segregant analysisCandidate geneLow temperatureSeed germination vigorSubstitution mapping

Identifiers

PMID34910270
PMCPMC8674402
OpenAlexW4200216376

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.