Evidence map›Paper›PMID 34910183›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2021

Effect of Time Since Death on Multipathogen Molecular Test Results of Postmortem Specimens Collected Using Minimally Invasive Tissue Sampling Techniques.

Jeanette Dawa, Edwin Walong, Clayton Onyango, John Mathaiya, Peter Muturi, Milka Bunei, Washington Ochieng, Walter Barake, Josilene N Seixas, Lillian Mayieka and 12 more

Open access · hybridAbstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Minimally Invasive Tissue Sampling Surveillance Alliance-Facilitating the Expansion of Pathology-Based Mortality Surveillance.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
  5. Histopathology Is Key to Interpreting Multiplex Molecular Test Results From Postmortem Minimally Invasive Tissue Samples.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 5 institutions in 3 countries.

Jeanette DawaWashington State University, Global Health Programs (Kenya Office), Nairobi, Kenya.
Edwin WalongCollege of Health Sciences, University of Nairobi, Nairobi, Kenya.
Clayton OnyangoDivision of Global Health Protection, Centers for Disease Control and Prevention, Nairobi, Kenya.
John MathaiyaDepartment of Pathology, Thika Level 5 Hospital, Kiambu County, Kenya.
Peter MuturiWashington State University, Global Health Programs (Kenya Office), Nairobi, Kenya.
Milka BuneiWashington State University, Global Health Programs (Kenya Office), Nairobi, Kenya.
Washington OchiengCollege of Health Sciences, University of Nairobi, Nairobi, Kenya.
Walter BarakeCollege of Health Sciences, University of Nairobi, Nairobi, Kenya.
Josilene N SeixasInfectious Diseases Pathology Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Lillian MayiekaCentre for Global Health Research, Kenya Medical Research Institute, Nairobi, Kenya.
Melvin OchiengCentre for Global Health Research, Kenya Medical Research Institute, Nairobi, Kenya.
Victor OmballaCentre for Global Health Research, Kenya Medical Research Institute, Nairobi, Kenya.
Shirley LidechiCentre for Global Health Research, Kenya Medical Research Institute, Nairobi, Kenya.
Elizabeth HunspergerDivision of Global Health Protection, Centers for Disease Control and Prevention, Nairobi, Kenya.
Nancy A OtienoCentre for Global Health Research, Kenya Medical Research Institute, Nairobi, Kenya.
Jana M RitterInfectious Diseases Pathology Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Marc-Alain WiddowsonDivision of Global Health Protection, Centers for Disease Control and Prevention, Nairobi, Kenya.
Maureen H DiazRespiratory Diseases Branch, Division of Bacterial Diseases, National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Jonas M WinchellRespiratory Diseases Branch, Division of Bacterial Diseases, National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Roosecelis B MartinesInfectious Diseases Pathology Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Sherif R ZakiInfectious Diseases Pathology Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Sandra S ChavesInfluenza Program, Centers for Disease Control and Prevention, Nairobi, Kenya.ORCID 0000-0002-9453-7057
Centers for Disease Control and Prevention · USKenya Medical Research Institute · KECenters for Disease Control and Prevention · KEUniversity of Nairobi · KEWashington State Department of Health · US

Funding

Bill and Melinda Gates Foundation OPP1168515
6 · The paper itself

Abstract

backgroundWe used postmortem minimally invasive tissue sampling (MITS) to assess the effect of time since death on molecular detection of pathogens among respiratory illness-associated deaths.

methodsSamples were collected from 20 deceased children (aged 1-59 months) hospitalized with respiratory illness from May 2018 through February 2019. Serial lung and/or liver and blood samples were collected using MITS starting soon after death and every 6 hours thereafter for up to 72 hours. Bodies were stored in the mortuary refrigerator for the duration of the study. All specimens were analyzed using customized multipathogen TaqMan® array cards (TACs).

resultsWe identified a median of 3 pathogens in each child's lung tissue (range, 1-8; n = 20), 3 pathogens in each child's liver tissue (range, 1-4; n = 5), and 2 pathogens in each child's blood specimen (range, 0-4; n = 5). Pathogens were not consistently detected across all collection time points; there was no association between postmortem interval and the number of pathogens detected (P = .43) and no change in TAC cycle threshold value over time for pathogens detected in lung tissue. Human ribonucleoprotein values indicated that specimens collected were suitable for testing throughout the study period.

conclusionsResults suggest that lung, liver, and blood specimens can be collected using MITS procedures up to 4 days after death in adequately preserved bodies. However, inconsistent pathogen detection in samples needs careful consideration before drawing definitive conclusions on the etiologic causes of death.

Indexed as

LungSpecimen HandlingAutopsyCause of DeathChildChild, PreschoolData CollectionHumansInfantminimally invasive tissue samplingMITSmolecular diagnosispediatric respiratory deathpostmortem interval

Identifiers

PMID34910183
PMCPMC8672767
OpenAlexW4200472656

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.