Evidence map›Paper›PMID 34910176›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2021

Minimally Invasive Tissue Sampling as an Alternative to Complete Diagnostic Autopsies in the Context of Epidemic Outbreaks and Pandemics: The Example of Coronavirus Disease 2019 (COVID-19).

Quique Bassat, Rosauro Varo, Juan Carlos Hurtado, Lorena Marimon, Melania Ferrando, Mamudo R Ismail, Carla Carrilho, Fabiola Fernandes, Pedro Castro, Maria Maixenchs and 9 more

Abstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Observational
  2. Article
  3. Observational
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Minimally Invasive Tissue Sampling Surveillance Alliance-Facilitating the Expansion of Pathology-Based Mortality Surveillance.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Quique BassatISGlobal, Hospital Clínic-Universitat de Barcelona, Barcelona, Spain.ORCID 0000-0003-0875-7596
Rosauro VaroISGlobal, Hospital Clínic-Universitat de Barcelona, Barcelona, Spain.
Juan Carlos HurtadoISGlobal, Hospital Clínic-Universitat de Barcelona, Barcelona, Spain.
Lorena MarimonISGlobal, Hospital Clínic-Universitat de Barcelona, Barcelona, Spain.
Melania FerrandoISGlobal, Hospital Clínic-Universitat de Barcelona, Barcelona, Spain.
Mamudo R IsmailDepartment of Pathology, Faculty of Medicine, Eduardo Mondlane University, Maputo, Mozambique.
Carla CarrilhoDepartment of Pathology, Faculty of Medicine, Eduardo Mondlane University, Maputo, Mozambique.
Fabiola FernandesDepartment of Pathology, Faculty of Medicine, Eduardo Mondlane University, Maputo, Mozambique.
Pedro CastroMedical Intensive Care Unit, Hospital Clínic, Institut D'investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), University of Barcelona, Barcelona, Spain.
Maria MaixenchsISGlobal, Hospital Clínic-Universitat de Barcelona, Barcelona, Spain.
Maria Teresa Rodrigo-CalvoDepartment of Pathology, Hospital Clinic of Barcelona, Universitat de Barcelona, Barcelona, Spain.
José GuerreroDepartment of Pathology, Hospital Clinic of Barcelona, Universitat de Barcelona, Barcelona, Spain.
Antonio MartínezDepartment of Pathology, Hospital Clinic of Barcelona, Universitat de Barcelona, Barcelona, Spain.
Marcus V G LacerdaFundação de Medicina Tropical Dr Heitor Vieira Dourado, Manaus, Brazil.
Inacio MandomandoCentro de Investigação em Saúde de Manhiça, Maputo, Mozambique.
Clara MenéndezISGlobal, Hospital Clínic-Universitat de Barcelona, Barcelona, Spain.
Miguel J MartinezISGlobal, Hospital Clínic-Universitat de Barcelona, Barcelona, Spain.
Jaume OrdiISGlobal, Hospital Clínic-Universitat de Barcelona, Barcelona, Spain.
Natalia RakislovaISGlobal, Hospital Clínic-Universitat de Barcelona, Barcelona, Spain.

Funding

Bill and Melinda Gates Foundation OPP1180554
6 · The paper itself

Abstract

backgroundInfectious diseases' outbreak investigation requires, by definition, conducting a thorough epidemiological assessment while simultaneously obtaining biological samples for an adequate screening of potential responsible pathogens. Complete autopsies remain the gold-standard approach for cause-of-death evaluation and characterization of emerging diseases. However, for highly transmissible infections with a significant associated lethality, such as COVID-19, complete autopsies are seldom performed due to biosafety challenges, especially in low-resource settings. Minimally invasive tissue sampling (MITS) is a validated new approach based on obtaining postmortem samples from key organs and body fluids, a procedure that does not require advanced biosafety measures or a special autopsy room.

methodsWe aimed to review the use of MITS or similar procedures for outbreak investigation up to 27 March 2021 and their performance for evaluating COVID-19 deaths.

resultsAfter a literature review, we analyzed in detail the results of 20 studies conducted at international sites, whereby 216 COVID-19-related deaths were investigated. MITS provided a general and more granular understanding of the pathophysiological changes secondary to the infection and high-quality samples where the extent and degree of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)-related damage could be evaluated.

conclusionsMITS is a useful addition in the investigation and surveillance of infections occurring in outbreaks or epidemics. Its less invasive nature makes the tool more acceptable and feasible and reduces the risk of procedure-associated contagion, using basic biosafety measures. Standardized approaches protocolizing which samples should be collected-and under which exact biosafety measures-are necessary to facilitate and expand its use globally.

Indexed as

COVID-19AutopsyHumansPandemicsSARS-CoV-2COVID-19minimally invasive tissue samplingMITSoutbreakpandemicpostmortem

Identifiers

PMID34910176
PMCPMC8672745

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.