Evidence map›Paper›PMID 34908429›Full record

ArticleMicrobiology spectrum2021

Comparative Genomics Reveals Insights into Induction of Violacein Biosynthesis and Adaptive Evolution in

Xiaoqin Wu, Alexey E Kazakov, Sara Gushgari-Doyle, Xingli Yu, Valentine Trotter, Rhona Kayra Stuart, Romy Chakraborty

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbiology spectrum, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Xiaoqin WuClimate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, USA.
Alexey E KazakovEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, USA.
Sara Gushgari-DoyleClimate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, USA.
Xingli YuClimate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, USA.
Valentine TrotterEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, USA.
Rhona Kayra StuartBiosciences and Biotechnology Division, Lawrence Livermore National Laboratorygrid.250008.f, Livermore, California, USA.
Romy ChakrabortyClimate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, USA.ORCID 0000-0001-9326-554X
Lawrence Berkeley National Laboratory · USLawrence Livermore National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Violacein has different bioactive properties conferring distinct selective advantages, such as defense from predation and interspecific competition. Adaptation of

Indexed as

Adaptation, PhysiologicalGenome, BacterialGenomicsGeologic SedimentsIndolesOxalobacteraceaePhylogenyQuorum SensingSecondary MetabolismSoil MicrobiologyWater MicrobiologyIndolesviolaceinadaptationcomparative genomicsevolutiongenomicsJanthinobacteriumoligotrophicsubsurfaceviolacein

Identifiers

PMID34908429
PMCPMC8672880
OpenAlexW4200443402

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.