Evidence map›Paper›PMID 34904862›Full record

ArticlemSystems2021

Codon-Dependent Transcriptional Changes in Response to Tryptophan Limitation in the Tryptophan Auxotrophic Pathogens Chlamydia trachomatis and Streptococcus pyogenes.

Scot P Ouellette, Nathan D Hatch, Nicholas A Wood, Andrea L Herrera, Michael S Chaussee

Open access · goldAbstract read
In one paragraph

Article in mSystems, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. The role of tryptophan inFrontiers in cellular and infection microbiology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Scot P OuelletteDepartment of Pathology and Microbiology, University of Nebraska Medical Centergrid.266813.8, Omaha, Nebraska, USA.ORCID 0000-0002-3721-6839
Nathan D HatchDepartment of Pathology and Microbiology, University of Nebraska Medical Centergrid.266813.8, Omaha, Nebraska, USA.
Nicholas A WoodDepartment of Pathology and Microbiology, University of Nebraska Medical Centergrid.266813.8, Omaha, Nebraska, USA.ORCID 0000-0003-2527-5441
Andrea L HerreraDivision of Basic Biomedical Sciences, Sanford School of Medicine, University of South Dakotagrid.267169.d, Vermillion, South Dakota, USA.
Michael S ChausseeDivision of Basic Biomedical Sciences, Sanford School of Medicine, University of South Dakotagrid.267169.d, Vermillion, South Dakota, USA.
University of Nebraska Medical Center · USUniversity of South Dakota · US

Funding

UNMC Structural Biology CoreP20GM103427 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI PAUL L SORGEN · 2012 to 2026
$59.2M
UNMC/EPPLEY CANCER CENTER SUPPORT GRANTP30CA036727 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Joann B. Sweasy · 1985 to 2026
$55.0M
Defining the persistence associated transcriptome in Chlamydia trachomatisF31AI164863 · NIAID · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI HATCH, NATHAN D. · 2021 to 2022
$72k
National Science Foundation (NSF) 1810599NCI NIH HHS P30 CA036727NIAID NIH HHS F31 AI164863NIGMS NIH HHS P20 GM103427
6 · The paper itself

Abstract

Chlamydia trachomatis and Streptococcus pyogenes are among the most prevalent bacterial pathogens of humans. Interestingly, both pathogens are tryptophan (Trp) auxotrophs and must acquire this essential amino acid from their environment. For Chlamydia, an obligate intracellular bacterium, this means scavenging Trp from the host cell in which they reside. For Streptococcus, a primarily extracellular bacterium, this means scavenging Trp from the local environment. In the course of a natural immune response, both pathogens can be exposed to Trp-limiting conditions through the action of the interferon gamma-inducible IDO1 enzyme, which catabolizes Trp to

Indexed as

Chlamydiainterferon gammapersistencerelAStreptococcusstringent responsetryptophan

Identifiers

PMID34904862
PMCPMC8670374
OpenAlexW4200002842

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.