Evidence map›Paper›PMID 34904860›Full record

ArticlemSystems2021

Taxon-Specific Shifts in Bacterial and Archaeal Transcription of Dissolved Organic Matter Cycling Genes in a Stratified Fjord.

Benjamin Pontiller, Clara Pérez-Martínez, Carina Bunse, Christofer M G Osbeck, José M González, Daniel Lundin, Jarone Pinhassi

Open access · goldAbstract read
In one paragraph

Article in mSystems, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Benjamin PontillerCentre for Ecology and Evolution in Microbial Model Systems-EEMiS, Linnaeus Universitygrid.8148.5, Kalmar, Sweden.ORCID 0000-0003-4787-7021
Clara Pérez-MartínezCentre for Ecology and Evolution in Microbial Model Systems-EEMiS, Linnaeus Universitygrid.8148.5, Kalmar, Sweden.
Carina BunseCentre for Ecology and Evolution in Microbial Model Systems-EEMiS, Linnaeus Universitygrid.8148.5, Kalmar, Sweden.
Christofer M G OsbeckCentre for Ecology and Evolution in Microbial Model Systems-EEMiS, Linnaeus Universitygrid.8148.5, Kalmar, Sweden.
José M GonzálezDepartment of Microbiology, University of La Laguna, La Laguna, Tenerife, Spain.ORCID 0000-0002-9926-3323
Daniel LundinCentre for Ecology and Evolution in Microbial Model Systems-EEMiS, Linnaeus Universitygrid.8148.5, Kalmar, Sweden.
Jarone PinhassiCentre for Ecology and Evolution in Microbial Model Systems-EEMiS, Linnaeus Universitygrid.8148.5, Kalmar, Sweden.ORCID 0000-0002-6405-1347
Linnaeus University · SECarl von Ossietzky Universität Oldenburg · DEUniversidad de La Laguna · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A considerable fraction of organic matter derived from photosynthesis in the euphotic zone settles into the ocean's interior and, as it progresses, is degraded by diverse microbial consortia that utilize a suite of extracellular enzymes and membrane transporters. Still, the molecular details that regulate carbon cycling across depths remain little explored. As stratification in fjords has made them attractive models to explore patterns in biological oceanography, we here analyzed bacterial and archaeal transcription in samples from five depth layers in the Gullmar Fjord, Sweden. Transcriptional variation over depth correlated with gradients in chlorophyll

Indexed as

carbohydrate-active enzymesdissolved organic carbonfjordmarine bacteriametatranscriptomicsNitrosopumiluspeptidasesstratificationtransportersvertical depth gradients

Identifiers

PMID34904860
PMCPMC8670421
OpenAlexW4226158954

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.