Evidence map›Paper›PMID 34904669›Full record

ArticleNucleic acids research2022

The flip-flop configuration of the PABP-dimer leads to switching of the translation function.

Sohyun Gu, Hyung-Min Jeon, Seung Woo Nam, Ka Young Hong, Md Shafiqur Rahman, Jong-Bong Lee, Youngjin Kim, Sung Key Jang

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
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  8. FMRP Enhances the Translation ofInternational journal of molecular sciences · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Sohyun GuDepartment of Life Sciences, Pohang University of Science and Technology, Nam-gu, Pohang 37673, Republic of Korea.
Hyung-Min JeonDepartment of Life Sciences, Pohang University of Science and Technology, Nam-gu, Pohang 37673, Republic of Korea.
Seung Woo NamDepartment of Life Sciences, Pohang University of Science and Technology, Nam-gu, Pohang 37673, Republic of Korea.
Ka Young HongDepartment of Life Sciences, Pohang University of Science and Technology, Nam-gu, Pohang 37673, Republic of Korea.
Md Shafiqur RahmanDepartment of Life Sciences, Pohang University of Science and Technology, Nam-gu, Pohang 37673, Republic of Korea.
Jong-Bong LeeSchool of Interdisciplinary Bioscience & Bioengineering, Pohang University of Science and Technology, Nam-gu, Pohang 37673, Republic of Korea.
Youngjin KimDepartment of Life Sciences, Pohang University of Science and Technology, Nam-gu, Pohang 37673, Republic of Korea.
Sung Key JangDepartment of Life Sciences, Pohang University of Science and Technology, Nam-gu, Pohang 37673, Republic of Korea.
Pohang University of Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Poly(A)-binding protein (PABP) is a translation initiation factor that interacts with the poly(A) tail of mRNAs. PABP bound to poly(A) stimulates translation by interacting with the eukaryotic initiation factor 4G (eIF4G), which brings the 3' end of an mRNA close to its 5' m7G cap structure through consecutive interactions of the 3'-poly(A)-PABP-eIF4G-eIF4E-5' m7G cap. PABP is a highly abundant translation factor present in considerably larger quantities than mRNA and eIF4G in cells. However, it has not been elucidated how eIF4G, present in limited cellular concentrations, is not sequestered by mRNA-free PABP, present at high cellular concentrations, but associates with PABP complexed with the poly(A) tail of an mRNA. Here, we report that RNA-free PABPs dimerize with a head-to-head type configuration of PABP, which interferes in the interaction between PABP and eIF4G. We identified the domains of PABP responsible for PABP-PABP interaction. Poly(A) RNA was shown to convert the PABP-PABP complex into a poly(A)-PABP complex, with a head-to-tail-type configuration of PABP that facilitates the interaction between PABP and eIF4G. Lastly, we showed that the transition from the PABP dimer to the poly(A)-PABP complex is necessary for the translational activation function.

Indexed as

Cell Line, TumorEukaryotic Initiation Factor-4GHumansPoly(A)-Binding ProteinsProtein BindingProtein MultimerizationRNA, MessengerEukaryotic Initiation Factor-4GPoly(A)-Binding ProteinsRNA, Messenger

Identifiers

PMID34904669
PMCPMC8754640
OpenAlexW4200076491

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.