Evidence map›Paper›PMID 34904658›Full record

ArticleNucleic acids research2022

An epigenetic switch activates bacterial quorum sensing and horizontal transfer of an integrative and conjugative element.

Joshua P Ramsay, Tahlia R Bastholm, Callum J Verdonk, Dinah D Tambalo, John T Sullivan, Liam K Harold, Beatrice A Panganiban, Elena Colombi, Benjamin J Perry, William Jowsey and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

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  14. The Type IV Secretion System (T4SS) Mediates Symbiosis betweenApplied and environmental microbiology · 2023
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  15. Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 3 countries.

Joshua P RamsayCurtin Medical School and Curtin Health Innovation Research Institute, Curtin University, Perth, WA 6102, Australia.ORCID 0000-0002-1301-7077
Tahlia R BastholmCurtin Medical School and Curtin Health Innovation Research Institute, Curtin University, Perth, WA 6102, Australia.
Callum J VerdonkSchool of Molecular Sciences, University of Western Australia, Perth, WA 6009, Australia.
Dinah D TambaloBiology Department, University of Regina, Regina, SK S4S 0A2, Canada.
John T SullivanDepartment of Microbiology and Immunology, University of Otago, Dunedin, 9016, New Zealand.
Liam K HaroldDepartment of Microbiology and Immunology, University of Otago, Dunedin, 9016, New Zealand.
Beatrice A PanganibanCurtin Medical School and Curtin Health Innovation Research Institute, Curtin University, Perth, WA 6102, Australia.
Elena ColombiCurtin Medical School and Curtin Health Innovation Research Institute, Curtin University, Perth, WA 6102, Australia.
Benjamin J PerryDepartment of Microbiology and Immunology, University of Otago, Dunedin, 9016, New Zealand.
William JowseyDepartment of Microbiology and Immunology, University of Otago, Dunedin, 9016, New Zealand.
Calum MorrisDepartment of Microbiology and Immunology, University of Otago, Dunedin, 9016, New Zealand.
Michael F HynesDepartment of Biological Sciences, University of Calgary, Calgary, AB T2N 4V8, Canada.
Charles S BondSchool of Molecular Sciences, University of Western Australia, Perth, WA 6009, Australia.ORCID 0000-0002-9584-6783
Andrew D S CameronBiology Department, University of Regina, Regina, SK S4S 0A2, Canada.ORCID 0000-0003-1560-8572
Christopher K YostBiology Department, University of Regina, Regina, SK S4S 0A2, Canada.
Clive W RonsonDepartment of Microbiology and Immunology, University of Otago, Dunedin, 9016, New Zealand.ORCID 0000-0002-2217-9676
University of Otago · NZCurtin University · AUUniversity of Regina · CAThe University of Western Australia · AUUniversity of Calgary · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Horizontal transfer of the integrative and conjugative element ICEMlSymR7A converts non-symbiotic Mesorhizobium spp. into nitrogen-fixing legume symbionts. Here, we discover subpopulations of Mesorhizobium japonicum R7A become epigenetically primed for quorum-sensing (QS) and QS-activated horizontal transfer. Isolated populations in this state termed R7A* maintained these phenotypes in laboratory culture but did not transfer the R7A* state to recipients of ICEMlSymR7A following conjugation. We previously demonstrated ICEMlSymR7A transfer and QS are repressed by the antiactivator QseM in R7A populations and that the adjacently-coded DNA-binding protein QseC represses qseM transcription. Here RNA-sequencing revealed qseM expression was repressed in R7A* cells and that RNA antisense to qseC was abundant in R7A but not R7A*. Deletion of the antisense-qseC promoter converted cells into an R7A*-like state. An adjacently coded QseC2 protein bound two operator sites and repressed antisense-qseC transcription. Plasmid overexpression of QseC2 stimulated the R7A* state, which persisted following curing of this plasmid. The epigenetic maintenance of the R7A* state required ICEMlSymR7A-encoded copies of both qseC and qseC2. Therefore, QseC and QseC2, together with their DNA-binding sites and overlapping promoters, form a stable epigenetic switch that establishes binary control over qseM transcription and primes a subpopulation of R7A cells for QS and horizontal transfer.

Indexed as

Bacterial ProteinsGene Expression Regulation, BacterialMesorhizobiumConjugation, GeneticGenomic IslandsQuorum SensingSymbiosisBacterial Proteins

Identifiers

PMID34904658
PMCPMC8789080
OpenAlexW4200053390

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.