Evidence map›Paper›PMID 34903892›Full record

ArticleNature genetics2022

Discovery of a genetic module essential for assigning left-right asymmetry in humans and ancestral vertebrates.

Emmanuelle Szenker-Ravi, Tim Ott, Muznah Khatoo, Anne Moreau de Bellaing, Wei Xuan Goh, Yan Ling Chong, Anja Beckers, Darshini Kannesan, Guillaume Louvel, Priyanka Anujan and 31 more

Erratum issuedOpen access · greenAbstract read
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In one paragraph

Article in Nature genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 43 citations in OpenAlex.

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  7. Enigmatic Nodal and Lefty gene repertoire discrepancy: Latent evolutionary history revealed by vertebrate-wide phylogeny.Developmental dynamics : an official publication of the American Association of Anatomists · 2025
    Review
  8. Molecular anatomy of emerging Xenopus left-right organizer at successive developmental stages.Developmental dynamics : an official publication of the American Association of Anatomists · 2025
    Article
  9. Article
  10. Recessive genetic contribution to congenital heart disease in 5,424 probands.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Article
  12. Article
  13. bioRxiv : the preprint server for biology · 2024
    Article
  14. Article
  15. [Clinical Characteristics Analysis of 1051 Cases of Cleft Lip With/Without Cleft Palate in the Ethnic Tibetan Population].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2024
    Article
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  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

41 authors at 20 institutions in 8 countries.

Emmanuelle Szenker-Ravi *Laboratory of Human Genetics and Therapeutics, Genome Institute of Singapore (GIS), A*STAR, Singapore, Singapore. emmanuelle.szenker@reversade.com.ORCID http://orcid.org/0000-0003-4839-737X
Tim Ott *Institute of Biology, University of Hohenheim, Stuttgart, Germany.
Muznah KhatooLaboratory of Human Genetics and Therapeutics, Genome Institute of Singapore (GIS), A*STAR, Singapore, Singapore.
Anne Moreau de BellaingLaboratoire de Cardiogénétique, Groupe Hospitalier Est, Hospices Civils de Lyon, Lyon, France.
Wei Xuan GohLaboratory of Human Genetics and Therapeutics, Genome Institute of Singapore (GIS), A*STAR, Singapore, Singapore.
Yan Ling ChongInstitute of Molecular and Cell Biology (IMCB), A*STAR, Singapore, Singapore.
Anja BeckersInstitute for Molecular Biology, Hannover Medical School, Hannover, Germany.ORCID http://orcid.org/0000-0003-3191-4457
Darshini KannesanLaboratory of Human Genetics and Therapeutics, Genome Institute of Singapore (GIS), A*STAR, Singapore, Singapore.
Guillaume LouvelInstitut de Biologie de l'Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS, INSERM, PSL Research University, Paris, France.ORCID http://orcid.org/0000-0002-7745-0785
Priyanka AnujanInstitute of Molecular and Cell Biology (IMCB), A*STAR, Singapore, Singapore.
Vydianathan RaviInstitute of Molecular and Cell Biology (IMCB), A*STAR, Singapore, Singapore.ORCID http://orcid.org/0000-0003-0807-7697
Carine BonnardSkin Research Institute of Singapore (SRIS), A*STAR, Singapore, Singapore.ORCID http://orcid.org/0000-0003-1922-017X
Sébastien MouttonCPDPN, Pôle mère enfant, Maison de Santé Protestante Bordeaux Bagatelle, Talence, France.ORCID http://orcid.org/0000-0002-8942-6731
Patric SchoenPraxis Dr Patric SCHÖN, Oberschleissheim, Germany.
Mélanie FradinService de Génétique Médicale, Hôpital Sud, CHU de Rennes, Rennes, France.
Estelle ColinService de Génétique Médicale, CHU d'Angers, Angers, France.ORCID http://orcid.org/0000-0001-7913-3938
André MegarbaneDepartment of Human Genetics, Gilbert and Rose-Marie Chagoury School of Medicine, Lebanese American University, Beirut, Lebanon.ORCID http://orcid.org/0000-0003-0714-2469
Linda DaouDepartment of Pediatric Cardiology, Hôtel Dieu de France University Medical Center, Saint Joseph University, Alfred Naccache Boulevard, Achrafieh, Beirut, Lebanon.
Ghassan ChehabDepartment of Pediatric Cardiology, Hôtel Dieu de France University Medical Center, Saint Joseph University, Alfred Naccache Boulevard, Achrafieh, Beirut, Lebanon.
Sylvie Di FilippoService de Cardiologie Pédiatrique, Groupe Hospitalier Est, Hospices Civils de Lyon, Bron, France.
Caroline RooryckService de Génétique, University of Bordeaux, MRGM, INSERM U1211, CHU de Bordeaux, Bordeaux, France.
Jean-François DeleuzeUniversité Paris-Saclay, CEA, Centre National de Recherche en Génomique Humaine (CNRGH), Evry, France.ORCID http://orcid.org/0000-0002-5358-4463
Anne BolandUniversité Paris-Saclay, CEA, Centre National de Recherche en Génomique Humaine (CNRGH), Evry, France.ORCID http://orcid.org/0000-0001-8789-5676
Nicolas ArribardService de Cardiologie Pédiatrique, Hôpital Universitaire des Enfants Reine Fabiola (HUDERF), Brussels, Belgium.
Rukiye EkerPediatrics Department, Pediatric Cardiology Division, Istanbul Medical Faculty, Istanbul University, Istanbul, Turkey.
Sumanty TohariInstitute of Molecular and Cell Biology (IMCB), A*STAR, Singapore, Singapore.
Alvin Yu-Jin NgMolecular Diagnosis Centre (MDC), National University Hospital (NUH), Singapore, Singapore.ORCID http://orcid.org/0000-0002-1744-6063
Marlène RioFédération de Génétique, Hôpital Necker-Enfants Malades, Assistance Publique Hôpitaux de Paris, Paris, France.
Chun Teck LimBioinformatics Institute (BII), A*STAR, Singapore, Singapore.
Birgit EisenhaberBioinformatics Institute (BII), A*STAR, Singapore, Singapore.ORCID http://orcid.org/0000-0002-2910-7384
Frank EisenhaberBioinformatics Institute (BII), A*STAR, Singapore, Singapore.ORCID http://orcid.org/0000-0002-9599-5420
Byrappa VenkateshInstitute of Molecular and Cell Biology (IMCB), A*STAR, Singapore, Singapore.ORCID http://orcid.org/0000-0003-3620-0277
Jeanne AmielFédération de Génétique, Hôpital Necker-Enfants Malades, Assistance Publique Hôpitaux de Paris, Paris, France.
Hugues Roest CrolliusInstitut de Biologie de l'Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS, INSERM, PSL Research University, Paris, France.ORCID http://orcid.org/0000-0002-8209-173X
Christopher T GordonLaboratory of Embryology and Genetics of Malformations, Université de Paris, Imagine Institute, INSERM UMR 1163, Paris, France.ORCID http://orcid.org/0000-0002-9300-8399
Achim GosslerInstitute for Molecular Biology, Hannover Medical School, Hannover, Germany.ORCID http://orcid.org/0000-0002-9103-9116
Sudipto RoyInstitute of Molecular and Cell Biology (IMCB), A*STAR, Singapore, Singapore.
Tania Attie-BitachFédération de Génétique, Hôpital Necker-Enfants Malades, Assistance Publique Hôpitaux de Paris, Paris, France.ORCID http://orcid.org/0000-0002-1155-3626
Martin BlumInstitute of Biology, University of Hohenheim, Stuttgart, Germany. martin.blum@uni-hohenheim.de.ORCID http://orcid.org/0000-0002-4834-1520
Patrice BouvagnetCPDPN, Hôpital MFME, CHU de Martinique, Fort de France, France. patrice.bouvagnet@chu-martinique.fr.ORCID http://orcid.org/0000-0001-7583-0533
Bruno ReversadeLaboratory of Human Genetics and Therapeutics, Genome Institute of Singapore (GIS), A*STAR, Singapore, Singapore. bruno@reversade.com.ORCID http://orcid.org/0000-0002-4070-7997
Agency for Science, Technology and Research · SGHôpital Necker-Enfants Malades · FRCentre National de la Recherche Scientifique · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRHospices Civils de Lyon · FRMedizinische Hochschule Hannover · DEUniversity of Hohenheim · DECentre Hospitalier Universitaire d'Angers · FRCentre Hospitalier Universitaire de Martinique · MQCentre Hospitalier Universitaire de Rennes · FRFondation Jérôme-Lejeune · FRInfirmerie Protestante · FRInserm · FRIstanbul University · TRKoç University · TRLebanese University · LBNational University Hospital · SGQueen Fabiola Children's University Hospital · BESaint Joseph University · LBUniversité de Bordeaux · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The vertebrate left-right axis is specified during embryogenesis by a transient organ: the left-right organizer (LRO). Species including fish, amphibians, rodents and humans deploy motile cilia in the LRO to break bilateral symmetry, while reptiles, birds, even-toed mammals and cetaceans are believed to have LROs without motile cilia. We searched for genes whose loss during vertebrate evolution follows this pattern and identified five genes encoding extracellular proteins, including a putative protease with hitherto unknown functions that we named ciliated left-right organizer metallopeptide (CIROP). Here, we show that CIROP is specifically expressed in ciliated LROs. In zebrafish and Xenopus, CIROP is required solely on the left side, downstream of the leftward flow, but upstream of DAND5, the first asymmetrically expressed gene. We further ascertained 21 human patients with loss-of-function CIROP mutations presenting with recessive situs anomalies. Our findings posit the existence of an ancestral genetic module that has twice disappeared during vertebrate evolution but remains essential for distinguishing left from right in humans.

Indexed as

Biological EvolutionBody PatterningGene Regulatory NetworksMetalloproteasesAnimalsCiliaHumansLoss of Function MutationMetalloendopeptidasesProteinsVertebratesCIROP protein, humanMetalloendopeptidasesMetalloproteasesProteins

Identifiers

PMID34903892
OpenAlexW4200493623

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.