Evidence map›Paper›PMID 34903830›Full record

ArticleScientific reports2021

Metabolic profiling reveals nutrient preferences during carbon utilization in Bacillus species.

James D Chang, Ellen E Vaughan, Carmen Gu Liu, Joseph W Jelinski, Austen L Terwilliger, Anthony W Maresso

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Microbiology spectrum · 2026
    Article
  3. A ProbioticMicroorganisms · 2026
    Article
  4. Article
  5. Article
  6. Fast-growingbioRxiv : the preprint server for biology · 2025
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

James D ChangThe Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.
Ellen E VaughanThe Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.
Carmen Gu LiuThe Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.
Joseph W JelinskiThe Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.
Austen L TerwilligerThe Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.
Anthony W MaressoThe Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA. anthony.maresso@bcm.edu.

Funding

Nutrient Uptake during Anthrax DiseaseR01AI097167 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI MARESSO, ANTHONY W · 2012 to 2022
$3.5M
The Importance and Function of Heme Degrading Enzymes during Anthrax DiseaseR21AI125778 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI MARESSO, ANTHONY W · 2017 to 2018
$436k
Next-stage Development of Heme Transporters as a Vaccine for AnthraxR21AI133001 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI MARESSO, ANTHONY W · 2017 to 2018
$436k
NIAID NIH HHS R01 AI097167NIAID NIH HHS R21 AI125778NIAID NIH HHS R21 AI133001
6 · The paper itself

Abstract

The genus Bacillus includes species with diverse natural histories, including free-living nonpathogenic heterotrophs such as B. subtilis and host-dependent pathogens such as B. anthracis (the etiological agent of the disease anthrax) and B. cereus, a cause of food poisoning. Although highly similar genotypically, the ecological niches of these three species are mutually exclusive, which raises the untested hypothesis that their metabolism has speciated along a nutritional tract. Here, we developed a pipeline for quantitative total assessment of the use of diverse sources of carbon for general metabolism to better appreciate the "culinary preferences" of three distinct Bacillus species, as well as related Staphylococcus aureus. We show that each species has widely varying metabolic ability to utilize diverse sources of carbon that correlated to their ecological niches. This approach was applied to the growth and survival of B. anthracis in a blood-like environment and find metabolism shifts from sugar to amino acids as the preferred source of energy. Finally, various nutrients in broth and host-like environments are identified that may promote or interfere with bacterial metabolism during infection.

Indexed as

MetabolomeBacillusCarbonMetabolomicsCarbon

Identifiers

PMID34903830
PMCPMC8669014

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.