ArticleProceedings of the National Academy of Sciences of the United States of America2021
Structure and RNA template requirements of
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Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.
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28citing papers in PubMed
7.1field-weighted citation impact, top 3% of its field
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Who cites it
28 citing papers in PubMed, 39 citations in OpenAlex.
- Presence and function of small RNAs during plant reproduction.RNA biology · 2026Review
- An evolutionarily conserved N-terminal domain of RRF-3 governs GTSF-1 binding in nematodes.EMBO reports · 2026Article
- Multiple Argonaute complexes orchestrate epigenetic silencing in the Arabidopsis germline.Nature communications · 2026Article
- Functional allelic diversity of PTGS components revealed by a high-throughput RUBY-based screening.The Plant journal : for cell and molecular biology · 2026Article
- Epigenomics and Non-Coding RNAs in Soybean Adaptation to Abiotic Stresses.International journal of molecular sciences · 2025Review
- Molecular Mechanisms Underlying the Establishment, Maintenance, and Removal of DNA Methylation in Plants.Annual review of plant biology · 2025Review
- Epigenetic gene regulation in plants and its potential applications in crop improvement.Nature reviews. Molecular cell biology · 2025Review
- CLSY docking to Pol IV requires a conserved domain critical for small RNA biogenesis and transposon silencing.Nature communications · 2024Article
- Mathematical model of RNA-directed DNA methylation predicts tuning of negative feedback required for stable maintenance.Open biology · 2024Article
- Transcription elongation of the plant RNA polymerase IV is prone to backtracking.Science advances · 2024Article
- Forces driving transposable element load variation during Arabidopsis range expansion.The Plant cell · 2024Article
- Genome-wide identification and in silico characterization of major RNAi gene families in date palm (Phoenix dactylifera).BMC genomic data · 2024Article
- The plant siRNA landscape.The Plant cell · 2024Review
- Moving targets: Mechanisms regulating siRNA production and DNA methylation during plant development.Current opinion in plant biology · 2023Review
- DNA-dependent RNA polymerases in plants.The Plant cell · 2023Article
- Planting the seeds for a forest of RNAi pathways.PLoS biology · 2023Article
- A cryo-EM structure of KTF1-bound polymerase V transcription elongation complex.Nature communications · 2023Article
- Beyond transcription: compelling open questions in plant RNA biology.The Plant cell · 2023Article
- Small RNA-mediated DNA methylation during plant reproduction.The Plant cell · 2023Review
- Exploring the Seasonal Dynamics and Molecular Mechanism of Wood Formation in Gymnosperm Trees.International journal of molecular sciences · 2023Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
12 authors at 3 institutions in 1 country.
Akihito FukudomeHHMI, Indiana University, Bloomington, IN 47405.ORCID 0000-0001-8924-1035
Jasleen SinghDepartment of Biology, Indiana University, Bloomington, IN 47405.
Vibhor MishraHHMI, Indiana University, Bloomington, IN 47405.ORCID 0000-0002-4846-4790
Eswar ReddemDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 47405.
Francisco Martinez-MarquezDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 47405.
Sabine WenzelDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 47405.
Rui YanCryoEM Facility, Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, VA 20147.
Momoko ShiozakiCryoEM Facility, Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, VA 20147.
Zhiheng YuCryoEM Facility, Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, VA 20147.
Joseph Che-Yen WangIndiana University Electron Microscopy Center, Indiana University, Bloomington, IN 47405.ORCID 0000-0001-6580-3531
Yuichiro TakagiDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 47405; ytakagi@iu.edu cpikaard@iu.edu.ORCID 0000-0002-0988-6798
Craig S PikaardHHMI, Indiana University, Bloomington, IN 47405; ytakagi@iu.edu cpikaard@iu.edu.ORCID 0000-0001-8204-7459
Indiana University Bloomington · USIndiana University School of MedicineHoward Hughes Medical Institute · US
Funding
Therapeutic Control of Aspirin-Exacerbated Respiratory DiseaseU19AI095219 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI Maria Gutierrez-Arcelus · 2011 to 2026
$29.1MGenetic Epidemiology of COPDU01HL089856 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI SILVERMAN, EDWIN K · 2007 to 2021
$20.7MMulti-omic approaches to mechanisms of vitamin D, environmental influences, and the microbiome on asthmaUH3OD023268 · OD · BRIGHAM AND WOMEN'S HOSPITAL · PI LITONJUA, AUGUSTO A, WEISS, SCOTT T · 2018 to 2022
$13.5MProspective Study of the Gut Microbiome in AgingRF1AG067744 · NIA · MASSACHUSETTS GENERAL HOSPITAL · PI CHAN, ANDREW T · 2020 to 2020
$11.7MChimeraX -- Next Generation Visualization and Analysis Software for Multiscale ModelingR01GM129325 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2018 to 2025
$5.2MFunctional Redundancy of Human Microbiome and its Implication in Fecal Microbiota TransplantationR01AI141529 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI LIU, YANG-YU · 2019 to 2023
$4.5MRoles of RNA Polymerases IV and V in siRNA-mediated gene silencingR01GM077590 · NIGMS · WASHINGTON UNIVERSITY · PI PIKAARD, CRAIG STUART · 2006 to 2020
$3.5MLong-term health consequences of birth by cesarean sectionR01HD093761 · NICHD · HARVARD SCHOOL OF PUBLIC HEALTH · PI CHAVARRO, JORGE EDUARDO · 2018 to 2022
$3.3MMechanism of transcription regulation by the MediatorR01GM111695 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI TAKAGI, YUICHIRO · 2015 to 2019
$1.5MNHLBI NIH HHS U01 HL089856NIAID NIH HHS R01 AI141529NIAID NIH HHS U19 AI095219NIA NIH HHS RF1 AG067744NICHD NIH HHS R01 HD093761NIGMS NIH HHS R01 GM077590NIGMS NIH HHS R01 GM111695NIGMS NIH HHS R01 GM129325NIH HHS UH3 OD023268
Abstract
RNA-dependent RNA polymerases play essential roles in RNA-mediated gene silencing in eukaryotes. In
Indexed as
Amino Acid SequenceArabidopsisArabidopsis ProteinsDNA, PlantGene Expression Regulation, EnzymologicGene Expression Regulation, PlantModels, MolecularProtein ConformationRNA-Dependent RNA PolymeraseRNA, PlantTranscription, GeneticArabidopsis ProteinsDNA, PlantRDR2 protein, ArabidopsisRNA-Dependent RNA PolymeraseRNA, PlantPol IV–RDR2 couplingpolymerase backtrackingRDR2RNA silencingsiRNA biogenesis
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.