Evidence map›Paper›PMID 34899005›Full record

ArticleEnvironmetrics2021

A hierarchical integrative group least absolute shrinkage and selection operator for analyzing environmental mixtures.

Jonathan Boss, Alexander Rix, Yin-Hsiu Chen, Naveen N Narisetty, Zhenke Wu, Kelly K Ferguson, Thomas F McElrath, John D Meeker, Bhramar Mukherjee

Abstract read
In one paragraph

Article in Environmetrics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jonathan BossDepartment of Biostatistics, University of Michigan, Ann Arbor, Michigan, U.S.A.
Alexander RixDepartment of Biostatistics, University of Michigan, Ann Arbor, Michigan, U.S.A.
Yin-Hsiu ChenGoogle Inc., Mountain View, California, U.S.A.
Naveen N NarisettyDepartment of Statistics, University of Illinois at Urbana-Champaign, Champaign, Illinois, U.S.A.
Zhenke WuDepartment of Biostatistics, University of Michigan, Ann Arbor, Michigan, U.S.A.
Kelly K FergusonEpidemiology Branch, National Institute of Environmental Health Sciences, Durham, North Carolina, U.S.A.
Thomas F McElrathDepartment of Obstetrics and Gynecology, Brigham and Women's Hospital, Boston, Massachusetts, U.S.A.
John D MeekerDepartment of Environmental Health Sciences, University of Michigan, Ann Arbor, Michigan, U.S.A.
Bhramar MukherjeeDepartment of Biostatistics, University of Michigan, Ann Arbor, Michigan, U.S.A.

Funding

XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI THEODORE S LAWRENCE · 1988 to 2026
$178.2M
Research Experiences and Training Coordination CoreP42ES017198 · NIEHS · NORTHEASTERN UNIVERSITY · PI ALSHAWABKEH, AKRAM N · 2010 to 2024
$38.6M
Environmental Influences on Child Health Outcomes in Puerto Rico (ECHO-PRO)UH3OD023251 · OD · NORTHEASTERN UNIVERSITY · PI Akram N Alshawabkeh · 2018 to 2026
$24.0M
Strategic Vision & Impact on Environmental HealthP30ES017885 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Dana Dolinoy · 2011 to 2026
$21.3M
Environmental PAH exposure and preeclampsia risk: Investigation of PE subtypes and the role of inflammation and oxidative stress.R01ES031591 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI John D. Meeker · 2021 to 2026
$3.9M
Bisphenol A and Phthalate Exposure in Relation to Fetal Growth and Preterm BirthR01ES018872 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MEEKER, JOHN D. · 2010 to 2014
$2.6M
Efficient Design and Analytic Strategies for Enhancing the Power of Detecting G XR21ES020811 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MUKHERJEE, BHRAMAR · 2012 to 2014
$447k
NCI NIH HHS P30 CA046592NIEHS NIH HHS P30 ES017885NIEHS NIH HHS P42 ES017198NIEHS NIH HHS R01 ES018872NIEHS NIH HHS R01 ES031591NIEHS NIH HHS R21 ES020811NIH HHS UH3 OD023251
6 · The paper itself

Abstract

Environmental health studies are increasingly measuring multiple pollutants to characterize the joint health effects attributable to exposure mixtures. However, the underlying dose-response relationship between toxicants and health outcomes of interest may be highly nonlinear, with possible nonlinear interaction effects. Existing penalized regression methods that account for exposure interactions either cannot accommodate nonlinear interactions while maintaining strong heredity or are computationally unstable in applications with limited sample size. In this paper, we propose a general shrinkage and selection framework to identify noteworthy nonlinear main and interaction effects among a set of exposures. We design hierarchical integrative group least absolute shrinkage and selection operator (HiGLASSO) to (a) impose strong heredity constraints on two-way interaction effects (hierarchical), (b) incorporate adaptive weights without necessitating initial coefficient estimates (integrative), and (c) induce sparsity for variable selection while respecting group structure (group LASSO). We prove sparsistency of the proposed method and apply HiGLASSO to an environmental toxicants dataset from the LIFECODES birth cohort, where the investigators are interested in understanding the joint effects of 21 urinary toxicant biomarkers on urinary 8-isoprostane, a measure of oxidative stress. An implementation of HiGLASSO is available in the higlasso R package, accessible through the Comprehensive R Archive Network.

Indexed as

Environmental exposuresGroup LASSOInteractionNonlinearityStrong heredity

Identifiers

PMID34899005
PMCPMC8664243

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.