Evidence map›Paper›PMID 34893624›Full record

ArticleScientific reports2021

Using imputation to provide harmonized longitudinal measures of cognition across AIBL and ADNI.

Rosita Shishegar, Timothy Cox, David Rolls, Pierrick Bourgeat, Vincent Doré, Fiona Lamb, Joanne Robertson, Simon M Laws, Tenielle Porter, Jurgen Fripp and 8 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Data‑driven cognitive composites predict Aβ‑related decline and progression to MCI: the ADOPIC study.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
    Article
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  5. Overview of Alzheimer's Disease Neuroimaging Initiative and future clinical trials.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Review
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  7. LD-informed deep learning for Alzheimer's gene loci detection using WGS data.medRxiv : the preprint server for health sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 2 countries.

Rosita ShishegarThe Australian e-Health Research Centre, CSIRO, Melbourne, Australia. rosita.shishegar@csiro.au.
Timothy CoxThe Australian e-Health Research Centre, CSIRO, Melbourne, Australia.
David RollsThe Australian e-Health Research Centre, CSIRO, Melbourne, Australia.
Pierrick BourgeatThe Australian e-Health Research Centre, CSIRO, Melbourne, Australia.
Vincent DoréThe Australian e-Health Research Centre, CSIRO, Melbourne, Australia.
Fiona LambDepartment of Molecular Imaging and Therapy, Austin Health, Heidelberg, VIC, Australia.
Joanne RobertsonFlorey Institute of Neuroscience and Mental Health, The University of Melbourne, Parkville, VIC, Australia.
Simon M LawsCentre for Precision Health, Edith Cowan University, Joondalup, WA, Australia.
Tenielle PorterCentre for Precision Health, Edith Cowan University, Joondalup, WA, Australia.
Jurgen FrippThe Australian e-Health Research Centre, CSIRO, Melbourne, Australia.
Duygu TosunDepartment of Radiology and Biomedical Imaging, University of California-San Francisco, San Francisco, CA, USA.
Paul MaruffCogstate Ltd., Melbourne, VIC, Australia.
Greg SavageDepartment of Psychology, Macquarie University, Sydney, NSW, Australia.
Christopher C RoweDepartment of Molecular Imaging and Therapy, Austin Health, Heidelberg, VIC, Australia.
Colin L MastersFlorey Institute of Neuroscience and Mental Health, The University of Melbourne, Parkville, VIC, Australia.
Michael W WeinerDepartment of Radiology and Biomedical Imaging, University of California-San Francisco, San Francisco, CA, USA.
Victor L VillemagneDepartment of Molecular Imaging and Therapy, Austin Health, Heidelberg, VIC, Australia.
Samantha C BurnhamThe Australian e-Health Research Centre, CSIRO, Melbourne, Australia.
Commonwealth Scientific and Industrial Research Organisation · AUUniversity of Melbourne · AUCurtin University · AUUniversity of California, San Francisco · USAustin Health · AUAustralian e-Health Research Centre · AUMacquarie University · AUUniversity of Pittsburgh · US

Funding

Democratising Machine Learning for researchers working in Alzheimer's spaceR01AG058676 · NIA · UNIVERSITY OF MELBOURNE · PI MASTERS, COLIN · 2018 to 2022
$10.9M
NIA NIH HHS R01 AG058676
6 · The paper itself

Abstract

To improve understanding of Alzheimer's disease, large observational studies are needed to increase power for more nuanced analyses. Combining data across existing observational studies represents one solution. However, the disparity of such datasets makes this a non-trivial task. Here, a machine learning approach was applied to impute longitudinal neuropsychological test scores across two observational studies, namely the Australian Imaging, Biomarkers and Lifestyle Study (AIBL) and the Alzheimer's Disease Neuroimaging Initiative (ADNI) providing an overall harmonised dataset. MissForest, a machine learning algorithm, capitalises on the underlying structure and relationships of data to impute test scores not measured in one study aligning it to the other study. Results demonstrated that simulated missing values from one dataset could be accurately imputed, and that imputation of actual missing data in one dataset showed comparable discrimination (p < 0.001) for clinical classification to measured data in the other dataset. Further, the increased power of the overall harmonised dataset was demonstrated by observing a significant association between CVLT-II test scores (imputed for ADNI) with PET Amyloid-β in MCI APOE-ε4 homozygotes in the imputed data (N = 65) but not for the original AIBL dataset (N = 11). These results suggest that MissForest can provide a practical solution for data harmonization using imputation across studies to improve power for more nuanced analyses.

Indexed as

CognitionNeuroimagingAgedAged, 80 and overAlgorithmsAlzheimer DiseaseAmyloid beta-PeptidesAustraliaBiomarkersCognitive DysfunctionComputational BiologyData AnalysisFemaleHumansLongitudinal StudiesMaleAmyloid beta-PeptidesBiomarkers

Identifiers

PMID34893624
PMCPMC8664816
OpenAlexW4200350001

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.