Evidence map›Paper›PMID 34893089›Full record

ArticleGenome biology2021

Microbial co-occurrence complicates associations of gut microbiome with US immigration, dietary intake and obesity.

Zheng Wang, Mykhaylo Usyk, Yoshiki Vázquez-Baeza, Guo-Chong Chen, Carmen R Isasi, Jessica S Williams-Nguyen, Simin Hua, Daniel McDonald, Bharat Thyagarajan, Martha L Daviglus and 7 more

Open access · goldAbstract read
In one paragraph

Article in Genome biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
5.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 72 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. SIMBA-GNN: mechanistic graph learning for microbiome prediction.NPJ systems biology and applications · 2025
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  8. Interplays ofNutrients · 2025
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  11. Article
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  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Obesity and metabolic disease in migrants: a role for the gut microbiome?Frontiers in clinical diabetes and healthcare · 2025
    Review
  19. Migration Spurs Changes in the Human Microbiome: a Review.Journal of racial and ethnic health disparities · 2024
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 1 country.

Zheng WangDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY, 10461, USA.
Mykhaylo UsykDepartments of Pediatrics, Albert Einstein College of Medicine, Bronx, New York, USA.
Yoshiki Vázquez-BaezaCenter for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA.
Guo-Chong ChenDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY, 10461, USA.
Carmen R IsasiDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY, 10461, USA.
Jessica S Williams-NguyenPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Simin HuaDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY, 10461, USA.
Daniel McDonaldDepartment of Pediatrics, University of California, San Diego, La Jolla, CA, USA.
Bharat ThyagarajanUniversity of Minnesota Medical Center, Minneapolis, MN, USA.
Martha L DaviglusUniversity of Illinois at Chicago, Chicago, IL, USA.
Jianwen CaiUniversity of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Kari E NorthUniversity of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Tao WangDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY, 10461, USA.
Rob KnightCenter for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA.
Robert D BurkDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY, 10461, USA.
Robert C Kaplan *Department of Epidemiology and Population Health, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY, 10461, USA. robert.kaplan@einsteinmed.org.
Qibin Qi *Department of Epidemiology and Population Health, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY, 10461, USA. qibin.qi@einsteinmed.org.
Albert Einstein College of Medicine · USFred Hutch Cancer Center · USUniversity of California, San Diego · USUniversity of North Carolina at Chapel Hill · USHarvard University · USJacobs (United States) · USUniversity of Illinois Chicago · USUniversity of Minnesota Medical Center · US

Funding

Hispanic Community Health Study - NIDCDN01HC65235 · NHLBI · YESHIVA UNIVERSITY · PI KAPLAN, ROBERT · 2007 to 2012
$16.0M
OTHER FUNCTIONS - R&D - HISPANIC COMMUNITY HEALTH STUDYN01HC65233 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CAI, JAIWEN · 2007 to 2012
$15.1M
HISPANIC COMMUNITY HEALTH STUDY - FIELD CENTERN01HC65236 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI DIVIGLUS, MARTHA · 2007 to 2012
$13.4M
HISPANIC COMMUNITY HEALTH STUDY - FIELD CENTERN01HC65234 · NHLBI · UNIVERSITY OF MIAMI CORAL GABLES · PI SCHNEIDERMAN, NEIL · 2007 to 2012
$13.1M
HISPANIC COMMUNITY HEALTH STUDY - FIELD CENTERN01HC65237 · NHLBI · SAN DIEGO STATE UNIVERSITY · PI TALAVERA, GREGORY · 2007 to 2013
$12.4M
DIETARY PATTERNS AND RISK OF CARDIOVASCULAR DISEASER01HL060712 · NHLBI · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI HU, FRANK B, QI, QIBIN · 1998 to 2021
$8.0M
New York Regional Center for Diabetes Translation Research - Translational Intervention Methodology CoreP30DK111022 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI JEFFREY GONZALEZ · 2016 to 2026
$7.8M
Integrated analysis of CVD risk in HIV: gut microbiota, immune function and metabolitesR01HL140976 · NHLBI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI KAPLAN, ROBERT C, KNIGHT, ROB · 2018 to 2021
$3.3M
NCI NIH HHS HHSN261201300004INCI NIH HHS HHSN261201300005INHLBI NIH HHS HHSN268201000001INHLBI NIH HHS HHSN268201000021CNHLBI NIH HHS HHSN268201000031CNHLBI NIH HHS N01 HC065235NHLBI NIH HHS N01HC65233NHLBI NIH HHS N01HC65234NHLBI NIH HHS N01HC65235NHLBI NIH HHS N01HC65236NHLBI NIH HHS N01HC65237NHLBI NIH HHS R01 HL060712NHLBI NIH HHS R01 HL140976NIDDK NIH HHS P30 DK111022
6 · The paper itself

Abstract

backgroundObesity and related comorbidities are major health concerns among many US immigrant populations. Emerging evidence suggests a potential involvement of the gut microbiome. Here, we evaluated gut microbiome features and their associations with immigration, dietary intake, and obesity in 2640 individuals from a population-based study of US Hispanics/Latinos.

resultsThe fecal shotgun metagenomics data indicate that greater US exposure is associated with reduced ɑ-diversity, reduced functions of fiber degradation, and alterations in individual taxa, potentially related to a westernized diet. However, a majority of gut bacterial genera show paradoxical associations, being reduced with US exposure and increased with fiber intake, but increased with obesity. The observed paradoxical associations are not explained by host characteristics or variation in bacterial species but might be related to potential microbial co-occurrence, as seen by positive correlations among Roseburia, Prevotella, Dorea, and Coprococcus. In the conditional analysis with mutual adjustment, including all genera associated with both obesity and US exposure in the same model, the positive associations of Roseburia and Prevotella with obesity did not persist, suggesting that their positive associations with obesity might be due to their co-occurrence and correlations with obesity-related taxa, such as Dorea and Coprococcus.

conclusionsAmong US Hispanics/Latinos, US exposure is associated with unfavorable gut microbiome profiles for obesity risk, potentially related to westernized diet during acculturation. Microbial co-occurrence could be an important factor to consider in future studies relating individual gut microbiome taxa to environmental factors and host health and disease.

Indexed as

EatingEmigration and ImmigrationGastrointestinal MicrobiomeAcculturationAdultAgedAged, 80 and overBacteriaCohort StudiesDietEmigrants and ImmigrantsFecesFemaleHispanic or LatinoHumansMaleRNA, Ribosomal, 16SHispanic populationMetagenomicsMicrobiomeObesity

Identifiers

PMID34893089
PMCPMC8665519
OpenAlexW4200288946

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.