Evidence map›Paper›PMID 34890456›Full record

ArticlePlant physiology2021

Aquaporin family lactic acid channel NIP2;1 promotes plant survival under low oxygen stress in Arabidopsis.

Zachary G Beamer, Pratyush Routray, Won-Gyu Choi, Margaret K Spangler, Ansul Lokdarshi, Daniel M Roberts

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 35 citations in OpenAlex.

  1. Linking cellular metabolism to chromatin modifications in plants.Journal of integrative plant biology · 2026
    Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Genome-wide identification of aquaporin family inFrontiers in plant science · 2026
    Article
  7. Article
  8. A Brief Overview of the Epigenetic Regulatory Mechanisms in Plants.International journal of molecular sciences · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Analysis ofPlants (Basel, Switzerland) · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Zachary G BeamerDepartment of Biochemistry and Cellular, and Molecular Biology, the University of Tennessee, Knoxville, Tennessee 37996, USA.ORCID 0000-0002-1216-0859
Pratyush RoutrayDepartment of Biochemistry and Cellular, and Molecular Biology, the University of Tennessee, Knoxville, Tennessee 37996, USA.ORCID 0000-0003-1189-5973
Won-Gyu ChoiDepartment of Biochemistry and Molecular Biology, The University of Nevada, Reno, Nevada 89557, USA.ORCID 0000-0002-0113-9376
Margaret K SpanglerDepartment of Biochemistry and Cellular, and Molecular Biology, the University of Tennessee, Knoxville, Tennessee 37996, USA.ORCID 0000-0003-0536-6485
Ansul LokdarshiDepartment of Biochemistry and Cellular, and Molecular Biology, the University of Tennessee, Knoxville, Tennessee 37996, USA.ORCID 0000-0003-2264-2701
Daniel M RobertsDepartment of Biochemistry and Cellular, and Molecular Biology, the University of Tennessee, Knoxville, Tennessee 37996, USA.ORCID 0000-0002-0780-7056
University of Tennessee at Knoxville · USUniversity of Nevada, Reno · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Under anaerobic stress, Arabidopsis thaliana induces the expression of a collection of core hypoxia genes that encode proteins for an adaptive response. Among these genes is NIP2;1, which encodes a member of the "Nodulin 26-like Intrinsic Protein" (NIP) subgroup of the aquaporin superfamily of membrane channel proteins. NIP2;1 expression is limited to the "anoxia core" region of the root stele under normal growth conditions, but shows substantial induction (up to 1,000-fold by 2-4 h of hypoxia) by low oxygen stress, and accumulation in all root tissues. During hypoxia, NIP2;1-GFP accumulates predominantly on the plasma membrane by 2 h, is distributed between the plasma and internal membranes during sustained hypoxia, and remains elevated in root tissues through 4 h of reoxygenation recovery. In response to hypoxia challenge, T-DNA insertion mutant nip2;1 plants exhibit elevated lactic acid within root tissues, reduced efflux of lactic acid, and reduced acidification of the external medium compared to wild-type plants. Previous biochemical evidence demonstrates that NIP2;1 has lactic acid channel activity, and our work supports the hypothesis that NIP2;1 prevents lactic acid toxicity by facilitating release of cellular lactic acid from the cytosol to the apoplast, supporting eventual efflux to the rhizosphere. In evidence, nip2;1 plants demonstrate poorer survival during argon-induced hypoxia stress. Expressions of the ethanolic fermentation transcript Alcohol Dehydrogenase1 and the core hypoxia-induced transcript Alanine Aminotransferase1 are elevated in nip2;1, and expression of the Glycolate Oxidase3 transcript is reduced, suggesting NIP2;1 lactic acid efflux regulates other pyruvate and lactate metabolism pathways.

Indexed as

Adaptation, PhysiologicalAquaporinsArabidopsisGene Expression Regulation, PlantGenes, PlantHypoxiaLactic AcidPlants, Genetically ModifiedAquaporinsLactic Acid

Identifiers

PMID34890456
PMCPMC8644545
OpenAlexW3162182814

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.