Evidence map›Paper›PMID 34887573›Full record

ArticleNature medicine2021

PPIL4 is essential for brain angiogenesis and implicated in intracranial aneurysms in humans.

Tanyeri Barak, Emma Ristori, A Gulhan Ercan-Sencicek, Danielle F Miyagishima, Carol Nelson-Williams, Weilai Dong, Sheng Chih Jin, Andrew Prendergast, William Armero, Octavian Henegariu and 30 more

Open access · greenAbstract read
In one paragraph

Article in Nature medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 2 pooled it
3.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 2 syntheses or guidelines pooled it, 60 citations in OpenAlex.

  1. Gene therapy for intracranial aneurysms: systemic review.Journal of neurointerventional surgery · 2025
    Pooled it
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  8. Rare genetic variants inInternational journal of stroke : official journal of the International Stroke Society · 2025
    Article
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  11. iScience · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors at 6 institutions in 2 countries.

Tanyeri Barak *Department of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Emma Ristori *Department of Genetics, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0001-9999-2780
A Gulhan Ercan-SencicekDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Danielle F MiyagishimaDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0003-3257-5469
Carol Nelson-WilliamsDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0003-0768-4751
Weilai DongDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-8376-1758
Sheng Chih JinDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-5777-7262
Andrew PrendergastYale Cardiovascular Research Center, Department of Internal Medicine, Section of Cardiology, Yale School of Medicine, New Haven, CT, USA.
William ArmeroDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.
Octavian HenegariuDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-8971-1049
E Zeynep Erson-OmayDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Akdes Serin HarmancıDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Mikhael GuyYale Center for Research Computing, Yale University, New Haven, CT, USA.
Batur GültekinDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Deniz KilicDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-0646-6413
Devendra K RaiDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Nükte GocDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Stephanie Marie AguileraDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0001-8926-2311
Burcu GülezDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Selin AltinokDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Kent OzcanDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Yanki YarmanDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-7584-6903
Süleyman CoskunDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Emily SempouDepartment of Pediatrics, Yale School of Medicine, New Haven, CT, USA.
Engin DenizDepartment of Pediatrics, Yale School of Medicine, New Haven, CT, USA.
Jared HintzenYale Cardiovascular Research Center, Department of Internal Medicine, Section of Cardiology, Yale School of Medicine, New Haven, CT, USA.
Andrew CoxDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-9394-5702
Elena FomchenkoDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Su Woong JungDivision of Nephrology, Department of Internal Medicine, Kyung Hee University Hospital at Gangdong, Seoul, Korea.
Ali Kemal OzturkDepartment of Neurosurgery, Pennsylvania Hospital, University of Pennsylvania Health System, Philadelphia, Pennsylvania, USA.
Angeliki LouviDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0003-1737-8707
Kaya BilgüvarDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.
E Sander ConnollyDepartment of Neurosurgery, Columbia University College of Physicians and Surgeons, New York, NY, USA.
Mustafa K KhokhaDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.
Kristopher T KahleDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-5922-7547
Katsuhito YasunoDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
Richard P LiftonDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.
Ketu Mishra-GorurDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA. ketu.mishra@yale.edu.ORCID http://orcid.org/0000-0002-3182-4411
Stefania NicoliDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA. stefania.nicoli@yale.edu.ORCID http://orcid.org/0000-0001-7055-340X
Murat GünelDepartment of Neurosurgery, Yale School of Medicine, New Haven, CT, USA. murat.gunel@yale.edu.ORCID http://orcid.org/0000-0002-2290-7055
Yale University · USBroad Institute · USColumbia University · USKyung Hee University Hospital at Gangdong · KRPennsylvania Hospital · USWashington University in St. Louis · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Molecular Genetic Pathogenesis of Intracranial AneurysmsR01NS057756 · NINDS · YALE UNIVERSITY · PI GUNEL, MURAT · 2007 to 2016
$5.3M
Functional Validation of Intracranial Aneurysm Risk GenesR01NS111935 · NINDS · YALE UNIVERSITY · PI GUNEL, MURAT, LOUVI, ANGELIKI · 2019 to 2023
$3.0M
Analysis of Congenital Hydrocephalus Genes in XenopusR01NS127879 · NINDS · YALE UNIVERSITY · PI ENGIN DENIZ · 2022 to 2026
$2.3M
Integrating miR-107 into signaling pathways that coordinate neurogenesis and brain vascular permeabilityR01HL130246 · NHLBI · YALE UNIVERSITY · PI NICOLI, STEFANIA · 2016 to 2020
$2.1M
PPIL4 modulation of Notch links neurovascular malformation to brain aneurismR01NS109160 · NINDS · YALE UNIVERSITY · PI NICOLI, STEFANIA · 2019 to 2023
$1.8M
Integrative Genomic Analysis of Congenital Heart DiseaseR00HL143036 · NHLBI · WASHINGTON UNIVERSITY · PI JIN, SHENG CHIH · 2020 to 2022
$730k
Xenopus as a Model System for Hydrocephaly and Ependymal CiliogenesisR21NS116484 · NINDS · YALE UNIVERSITY · PI DENIZ, ENGIN · 2020 to 2021
$433k
NCATS NIH HHS UL1 TR001863NHLBI NIH HHS R00 HL143036NHLBI NIH HHS R01 HL130246NINDS NIH HHS R01 NS057756NINDS NIH HHS R01 NS109160NINDS NIH HHS R01 NS111935NINDS NIH HHS R01 NS127879NINDS NIH HHS R21 NS116484
6 · The paper itself

Abstract

Intracranial aneurysm (IA) rupture leads to subarachnoid hemorrhage, a sudden-onset disease that often causes death or severe disability. Although genome-wide association studies have identified common genetic variants that increase IA risk moderately, the contribution of variants with large effect remains poorly defined. Using whole-exome sequencing, we identified significant enrichment of rare, deleterious mutations in PPIL4, encoding peptidyl-prolyl cis-trans isomerase-like 4, in both familial and index IA cases. Ppil4 depletion in vertebrate models causes intracerebral hemorrhage, defects in cerebrovascular morphology and impaired Wnt signaling. Wild-type, but not IA-mutant, PPIL4 potentiates Wnt signaling by binding JMJD6, a known angiogenesis regulator and Wnt activator. These findings identify a novel PPIL4-dependent Wnt signaling mechanism involved in brain-specific angiogenesis and maintenance of cerebrovascular integrity and implicate PPIL4 gene mutations in the pathogenesis of IA.

Indexed as

BrainCyclophilinsExome SequencingHumansIntracranial AneurysmMutationNeovascularization, PathologicRNA-Binding ProteinsWnt Signaling PathwayCyclophilinsPPIL4 protein, humanRNA-Binding Proteins

Identifiers

PMID34887573
PMCPMC8768030
OpenAlexW4200525344

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.