Evidence map›Paper›PMID 34886891›Full record

ArticleGenome biology2021

Programmed genomic instability regulates neural transdifferentiation of human brain microvascular pericytes.

Saba Rezaei-Lotfi, Filip Vujovic, Mary Simonian, Neil Hunter, Ramin M Farahani

Open access · goldAbstract read
In one paragraph

Article in Genome biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Saba Rezaei-LotfiIDR/Westmead Institute for Medical Research, Westmead, NSW, 2145, Australia.
Filip VujovicIDR/Westmead Institute for Medical Research, Westmead, NSW, 2145, Australia.
Mary SimonianIDR/Westmead Institute for Medical Research, Westmead, NSW, 2145, Australia.
Neil HunterIDR/Westmead Institute for Medical Research, Westmead, NSW, 2145, Australia.
Ramin M FarahaniIDR/Westmead Institute for Medical Research, Westmead, NSW, 2145, Australia. ramin.mostofizadehfarahani@sydney.edu.au.ORCID 0000-0002-4400-4324
The University of Sydney · AUWestmead Institute for Medical Research · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTransdifferentiation describes transformation in vivo of specialized cells from one lineage into another. While there is extensive literature on forced induction of lineage reprogramming in vitro, endogenous mechanisms that govern transdifferentiation remain largely unknown. The observation that human microvascular pericytes transdifferentiate into neurons provided an opportunity to explore the endogenous molecular basis for lineage reprogramming.

resultsWe show that abrupt destabilization of the higher-order chromatin topology that chaperones lineage memory of pericytes is driven by transient global transcriptional arrest. This leads within minutes to localized decompression of the repressed competing higher-order chromatin topology and expression of pro-neural genes. Transition to neural lineage is completed by probabilistic induction of R-loops in key myogenic loci upon re-initiation of RNA polymerase activity, leading to depletion of the myogenic transcriptome and emergence of the neurogenic transcriptome.

conclusionsThese findings suggest that the global transcriptional landscape not only shapes the functional cellular identity of pericytes, but also stabilizes lineage memory by silencing the competing neural program within a repressed chromatin state.

Indexed as

BrainGenomic InstabilityBasic Helix-Loop-Helix ProteinsCell TransdifferentiationChromatinCRISPR-Cas SystemsHumansNeurogenesisNeuronsPericytesTranscriptomeASCL1 protein, humanATOH1 protein, humanBasic Helix-Loop-Helix ProteinsChromatin

Identifiers

PMID34886891
PMCPMC8656028
OpenAlexW4200098921

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.