Evidence map›Paper›PMID 34886813›Full record

ArticleBMC plant biology2021

Phytophthora infestans RXLR effector Pi04089 perturbs diverse defense-related genes to suppress host immunity.

Ming Luo, Xinyuan Sun, Yetong Qi, Jing Zhou, Xintong Wu, Zhendong Tian

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Deciphering the Molecular Interplay Between RXLR-EncodedInternational journal of molecular sciences · 2025
    Review
  2. Article
  3. PotatoBSLnc: a curated repository of potato long noncoding RNAs in response to biotic stress.Database : the journal of biological databases and curation · 2025
    Article
  4. Article
  5. Genomic and transcriptomic analyses ofFrontiers in microbiology · 2024
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ming LuoKey Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Wuhan, 430070, Hubei, China.
Xinyuan SunKey Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Wuhan, 430070, Hubei, China.
Yetong QiKey Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Wuhan, 430070, Hubei, China.
Jing ZhouKey Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Wuhan, 430070, Hubei, China.
Xintong WuKey Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Wuhan, 430070, Hubei, China.
Zhendong TianKey Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Wuhan, 430070, Hubei, China. tianzhd@mail.hzau.edu.cn.
Ministry of Agriculture and Rural Affairs · CNHubei University of Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe oomycete pathogen secretes many effectors into host cells to manipulate host defenses. For the majority of effectors, the mechanisms related to how they alter the expression of host genes and reprogram defenses are not well understood. In order to investigate the molecular mechanisms governing the influence that the Phytophthora infestans RXLR effector Pi04089 has on host immunity, a comparative transcriptome analysis was conducted on Pi04089 stable transgenic and wild-type potato plants.

resultsPotato plants stably expressing Pi04089 were more susceptible to P. infestans. RNA-seq analysis revealed that 658 upregulated genes and 722 downregulated genes were characterized in Pi04089 transgenic lines. A large number of genes involved in the biological process, including many defense-related genes and certain genes that respond to salicylic acid, were suppressed. Moreover, the comparative transcriptome analysis revealed that Pi04089 significantly inhibited the expression of many flg22 (a microbe-associated molecular pattern, PAMP)-inducible genes, including various Avr9/Cf-9 rapidly elicited (ACRE) genes. Four selected differentially expressed genes (StWAT1, StCEVI57, StKTI1, and StP450) were confirmed to be involved in host resistance against P. infestans when they were transiently expressed in Nicotiana benthamiana.

conclusionThe P. infestans effector Pi04089 was shown to suppress the expression of many resistance-related genes in potato plants. Moreover, Pi04089 was found to significantly suppress flg22-triggered defense signaling in potato plants. This research provides new insights into how an oomycete effector perturbs host immune responses at the transcriptome level.

Indexed as

Gene Expression Regulation, PlantPlant ImmunityDisease ResistanceGene Expression RegulationPhytophthora infestansPlant DiseasesPlants, Genetically ModifiedSolanum tuberosumTranscriptomeVirulence FactorsVirulence FactorsComparative transcriptomicsEffectorLate blightPlant defensePotatoPTI response

Identifiers

PMID34886813
PMCPMC8656059
OpenAlexW4200029934

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.