Evidence map›Paper›PMID 34884982›Full record

ArticleCancers2021

The Extracellular Matrix Environment of Clear Cell Renal Cell Carcinoma Determines Cancer Associated Fibroblast Growth.

Kyle H Bond, Takuto Chiba, Kieran P H Wynne, Calvin P H Vary, Sunder Sims-Lucas, Jeannine M Coburn, Leif Oxburgh

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Effects of a GlobalArteriosclerosis, thrombosis, and vascular biology · 2024
    Article
  12. Endothelial IL17RD promotes Western diet-induced aortic myeloid cell infiltration.Biochemical and biophysical research communications · 2024
    Article
  13. Review
  14. Article
  15. Review
  16. In Vivo Assessment of Laboratory-Grown Kidney Tissue Grafts.Bioengineering (Basel, Switzerland) · 2023
    Article
  17. 3D Tumor Models in Urology.International journal of molecular sciences · 2023
    Review
  18. Article
  19. New insights into fibrotic signaling in renal cell carcinoma.Frontiers in cell and developmental biology · 2023
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Kyle H BondRogosin Institute, 310 East 67th St., Room 2-43, New York, NY 10065, USA.
Takuto ChibaChildren's Hospital of Pittsburgh, 4401 Penn Ave., Rangos Research Building, Pittsburgh, PA 15224, USA.
Kieran P H WynneMaine Medical Center Research Institute, 81 Research Drive, Scarborough, ME 04074, USA.
Calvin P H VaryMaine Medical Center Research Institute, 81 Research Drive, Scarborough, ME 04074, USA.
Sunder Sims-LucasChildren's Hospital of Pittsburgh, 4401 Penn Ave., Rangos Research Building, Pittsburgh, PA 15224, USA.
Jeannine M CoburnBME Department, Worcester Polytechnic Institute, 60 Prescott St., Worcester, MA 01605, USA.
Leif OxburghRogosin Institute, 310 East 67th St., Room 2-43, New York, NY 10065, USA.ORCID 0000-0002-2825-7663
Children's Hospital of Pittsburgh · USThe Rogosin Institute · USMaine Medical Center · USUniversity College Dublin · IEWorcester Polytechnic Institute · US

Funding

The role of night shift work in metabolic disorders during and after pregnancyP20GM121301 · NIGMS · MAINEHEALTH · PI Elizabeth Scharnetzki · 2017 to 2026
$25.1M
NIGMS NIH HHS P20 GM121301NIGMS NIH HHS P20GM121301 (CV)United States Department of Defense KC170016 (LO)
6 · The paper itself

Abstract

Clear cell renal cell carcinoma (ccRCC) is the most common kidney cancer and is often caused by mutations in the oxygen-sensing machinery of kidney epithelial cells. Due to its pseudo-hypoxic state, ccRCC recruits extensive vasculature and other stromal components. Conventional cell culture methods provide poor representation of stromal cell types in primary cultures of ccRCC, and we hypothesized that mimicking the extracellular environment of the tumor would promote growth of both tumor and stromal cells. We employed proteomics to identify the components of ccRCC extracellular matrix (ECM) and found that in contrast to healthy kidney cortex, laminin, collagen IV, and entactin/nidogen are minor contributors. Instead, the ccRCC ECM is composed largely of collagen VI, fibronectin, and tenascin C. Analysis of single cell expression data indicates that cancer-associated fibroblasts are a major source of tumor ECM production. Tumor cells as well as stromal cells bind efficiently to a nine-component ECM blend characteristic of ccRCC. Primary patient-derived tumor cells bind the nine-component blend efficiently, allowing to us to establish mixed primary cultures of tumor cells and stromal cells. These miniature patient-specific replicas are conducive to microscopy and can be used to analyze interactions between cells in a model tumor microenvironment.

Indexed as

collagen VIcollagen XIIfibronectinHSPG2lamininlumicanperiostintenascin CTGFBI

Identifiers

PMID34884982
PMCPMC8657052
OpenAlexW3217489839

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.