Evidence map›Paper›PMID 34884638›Full record

ArticleInternational journal of molecular sciences2021

Drug Repurposing in Rare Diseases: An Integrative Study of Drug Screening and Transcriptomic Analysis in Nephropathic Cystinosis.

Francesco Bellomo, Ester De Leo, Anna Taranta, Laura Giaquinto, Gianna Di Giovamberardino, Sandro Montefusco, Laura Rita Rega, Anna Pastore, Diego Luis Medina, Diego Di Bernardo and 2 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Long-term outcomes in nephropathic cystinosis: a review.Pediatric nephrology (Berlin, Germany) · 2026
    Review
  5. Cystinosis and Cellular Energy Failure: Mitochondria at the Crossroads.International journal of molecular sciences · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. New Pharmacological Approaches for Rare Diseases.International journal of molecular sciences · 2023
    Article
  11. Article
  12. Metabolomic Analyses to Identify Candidate Biomarkers of Cystinosis.International journal of molecular sciences · 2023
    Article
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Francesco BellomoRenal Diseases Research Unit, Bambino Gesù Children's Hospital, IRCCS, 00165 Rome, Italy.ORCID 0000-0003-2912-8764
Ester De LeoRenal Diseases Research Unit, Bambino Gesù Children's Hospital, IRCCS, 00165 Rome, Italy.ORCID 0000-0003-0704-3882
Anna TarantaRenal Diseases Research Unit, Bambino Gesù Children's Hospital, IRCCS, 00165 Rome, Italy.
Laura GiaquintoTelethon InstituFte of Genetics and Medicine, 80078 Naples, Italy.
Gianna Di GiovamberardinoResearch Biobank, Bambino Gesù Children's Hospital, IRCCS, 00165 Rome, Italy.
Sandro MontefuscoTelethon InstituFte of Genetics and Medicine, 80078 Naples, Italy.
Laura Rita RegaRenal Diseases Research Unit, Bambino Gesù Children's Hospital, IRCCS, 00165 Rome, Italy.ORCID 0000-0003-4847-366X
Anna PastoreManagement Diagnostic Innovations Research Unit, Bambino Gesù Children's Hospital, IRCCS, 00165 Rome, Italy.ORCID 0000-0002-0990-9419
Diego Luis MedinaTelethon InstituFte of Genetics and Medicine, 80078 Naples, Italy.ORCID 0000-0002-7347-2645
Diego Di BernardoTelethon InstituFte of Genetics and Medicine, 80078 Naples, Italy.
Maria Antonietta De MatteisTelethon InstituFte of Genetics and Medicine, 80078 Naples, Italy.
Francesco EmmaRenal Diseases Research Unit, Bambino Gesù Children's Hospital, IRCCS, 00165 Rome, Italy.ORCID 0000-0002-0383-3468
Bambino Gesù Children's Hospital · ITTelethon Institute Of Genetics And Medicine · IT

Funding

Cystinosis Research Foundation CRFS-2011Governo Italiano 5x1000Governo Italiano Ricerca CorrenteItalian Association for Cancer Research IG2013_14761Telethon Foundation TGM11CB1
6 · The paper itself

Abstract

Diagnosis and cure for rare diseases represent a great challenge for the scientific community who often comes up against the complexity and heterogeneity of clinical picture associated to a high cost and time-consuming drug development processes. Here we show a drug repurposing strategy applied to nephropathic cystinosis, a rare inherited disorder belonging to the lysosomal storage diseases. This approach consists in combining mechanism-based and cell-based screenings, coupled with an affordable computational analysis, which could result very useful to predict therapeutic responses at both molecular and system levels. Then, we identified potential drugs and metabolic pathways relevant for the pathophysiology of nephropathic cystinosis by comparing gene-expression signature of drugs that share common mechanisms of action or that involve similar pathways with the disease gene-expression signature achieved with RNA-seq.

Indexed as

Drug RepositioningAmino Acid Transport Systems, NeutralCells, CulturedComputational BiologyCystinosisDrug Evaluation, PreclinicalHumansKidney DiseasesKidney Tubules, ProximalMetabolic Networks and PathwaysRare DiseasesTranscriptomeAmino Acid Transport Systems, NeutralCTNS protein, humancystinosisdrug repositioninghigh content screeninghigh throughput screeningtranscriptome

Identifiers

PMID34884638
PMCPMC8657658
OpenAlexW3216962992

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.