Evidence map›Paper›PMID 34882223›Full record

ArticleBriefings in bioinformatics2022

Evaluating the state of the art in missing data imputation for clinical data.

Yuan Luo

Abstract read
In one paragraph

Article in Briefings in bioinformatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

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  7. Time-series ECG Imputation Using a Pattern-Based Masking Framework.medRxiv : the preprint server for health sciences · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Yuan LuoDivision of Health and Biomedical Informatics, Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.ORCID 0000-0003-0195-7456

Funding

Modeling the Incompleteness and Biases of Health DataR01LM013337 · NLM · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LUO, YUAN · 2020 to 2023
$1.3M
NLM NIH HHS R01 LM013337
6 · The paper itself

Abstract

Clinical data are increasingly being mined to derive new medical knowledge with a goal of enabling greater diagnostic precision, better-personalized therapeutic regimens, improved clinical outcomes and more efficient utilization of health-care resources. However, clinical data are often only available at irregular intervals that vary between patients and type of data, with entries often being unmeasured or unknown. As a result, missing data often represent one of the major impediments to optimal knowledge derivation from clinical data. The Data Analytics Challenge on Missing data Imputation (DACMI) presented a shared clinical dataset with ground truth for evaluating and advancing the state of the art in imputing missing data for clinical time series. We extracted 13 commonly measured blood laboratory tests. To evaluate the imputation performance, we randomly removed one recorded result per laboratory test per patient admission and used them as the ground truth. DACMI is the first shared-task challenge on clinical time series imputation to our best knowledge. The challenge attracted 12 international teams spanning three continents across multiple industries and academia. The evaluation outcome suggests that competitive machine learning and statistical models (e.g. LightGBM, MICE and XGBoost) coupled with carefully engineered temporal and cross-sectional features can achieve strong imputation performance. However, care needs to be taken to prevent overblown model complexity. The challenge participating systems collectively experimented with a wide range of machine learning and probabilistic algorithms to combine temporal imputation and cross-sectional imputation, and their design principles will inform future efforts to better model clinical missing data.

Indexed as

AlgorithmsMachine LearningCross-Sectional StudiesData CollectionHumansModels, Statisticalclinical laboratory testmachine learningmissing data imputationtime series

Identifiers

PMID34882223
PMCPMC8769894

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.