ArticleG3 (Bethesda, Md.)2022
Genome sequence of the English grain aphid, Sitobion avenae and its endosymbiont Buchnera aphidicola.
Article in G3 (Bethesda, Md.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
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Who cites it
10 citing papers in PubMed, 13 citations in OpenAlex.
- Selenium nanoparticles enhance innate immunity in aphid-stressed oat plants by modulating photosynthetic pigments, sugar, nitrogen and fatty acid metabolism, and antioxidant defense.BMC plant biology · 2026Article
- Comprehensive Annotation of Olfactory and Gustatory Receptor Genes and Transposable Elements Revealed Their Evolutionary Dynamics in Aphids.Molecular biology and evolution · 2025Article
- Genomic insights into clonal diversity in UK populations of the potato aphid, Macrosiphum euphorbiae.BMC genomics · 2025Article
- Chromosome-level genome assembly of vetch aphid Megoura crassicauda (Hemiptera: Aphididae).Scientific data · 2025Article
- Chromosome-level genome assembly of soybean aphid.Scientific data · 2025Article
- A chromosome-level genome assembly of the cabbage aphid Brevicoryne brassicae.Scientific data · 2025Article
- Genome-Wide Comparative Analysis of the Cytochrome P450 Monooxygenase Family in 19 Aphid Species and Their Expression Analysis in 4 Cereal Crop Aphids.International journal of molecular sciences · 2024Article
- Genetic diversity in vector populations influences the transmission efficiency of an important plant virus.Biology letters · 2024Article
- Hybridisation has shaped a recent radiation of grass-feeding aphids.BMC biology · 2023Article
- Tracking Adaptive Pathways of Invasive Insects: Novel Insight from Genomics.International journal of molecular sciences · 2023Review
Corrections and comments
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Authors and funding
8 authors at 5 institutions in 2 countries.
Funding
Abstract
The English grain aphid, Sitobion avenae, is a major agricultural pest of wheat, barley and oats, and one of the principal vectors of barley yellow dwarf virus leading to significant reductions in grain yield, annually. Emerging resistance to and increasing regulation of insecticides has resulted in limited options for their control. Using PacBio HiFi data, we have produced a high-quality draft assembly of the S. avenae genome; generating a primary assembly with a total assembly size of 475.7 Mb, and an alternate assembly with a total assembly size of 430.8 Mb. Our primary assembly was highly contiguous with only 326 contigs and a contig N50 of 15.95 Mb. Assembly completeness was estimated at 97.7% using BUSCO analysis and 31,007 and 29,037 protein-coding genes were predicted from the primary and alternate assemblies, respectively. This assembly, which is to our knowledge the first for an insecticide resistant clonal lineage of English grain aphid, will provide novel insight into the molecular and mechanistic determinants of resistance and will facilitate future research into mechanisms of viral transmission and aphid behavior.
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