Evidence map›Paper›PMID 34877714›Full record

ArticleJournal of clinical laboratory analysis2022

Novel splicing-site mutation in DCAF17 gene causing Woodhouse-Sakati syndrome in a large consanguineous family.

Fozia Fozia, Khadim Shah, Rubina Nazli, Sher Alam Khan, Ijaz Ahmad, Noor Mohammad, Saadullah Khan, Amal Alotaibi

Open access · goldAbstract readCase Reports
In one paragraph

Article in Journal of clinical laboratory analysis, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Fozia FoziaDepartment of Biochemistry, Institute of Basic Medical Sciences (IBMS), Khyber Medical University (KMU), Peshawar, Khyber Pakhtunkhwa, Pakistan.
Khadim ShahDepartment of Biotechnology, COSMATS University Islamabad, Abbottabad Campus, Abbottabad, Khyber Pakhtunkhwa, Pakistan.
Rubina NazliDepartment of Biochemistry, Institute of Basic Medical Sciences (IBMS), Khyber Medical University (KMU), Peshawar, Khyber Pakhtunkhwa, Pakistan.
Sher Alam KhanDepartment of Biotechnology and Genetic Engineering, Kohat University of Science & Technology (KUST), Kohat, Khyber Pakhtunkhwa, Pakistan.
Ijaz AhmadDepartment of Chemistry, Kohat University of Science & Technology (KUST), Kohat, Khyber Pakhtunkhwa, Pakistan.
Noor MohammadDepartment of Biotechnology and Genetic Engineering, Kohat University of Science & Technology (KUST), Kohat, Khyber Pakhtunkhwa, Pakistan.
Saadullah KhanDepartment of Biotechnology and Genetic Engineering, Kohat University of Science & Technology (KUST), Kohat, Khyber Pakhtunkhwa, Pakistan.ORCID https://orcid.org/0000-0001-5037-1473
Amal AlotaibiBasic Science Department, College of Medicine, Princess Nourah Bint Abdulrahman University, Riyadh, Saudi Arabia.
Kohat University of Science and Technology · PKPrincess Nourah bint Abdulrahman University · SAAbbottabad University of Science and Technology · PKKhyber Medical University · PK

Funding

Deanship of Scientific Research at Princess Nourah bint Abdulrahman University through the Fast-track Research Funding Program
6 · The paper itself

Abstract

backgroundWoodhouse-Sakati syndrome is a rare autosomal recessive disease with endocrine and neuroectodermal aberrations with heterogeneous phenotypes and disease course. The most common phenotypes of the disease are progressive sensorineural hearing loss and alopecia, mild-to-moderate mental retardation and hypogonadism. The disease results from mutations in the DCAF17 gene.

methodHere, we reported a large consanguineous pedigree with multiple affected individuals with Woodhouse-Sakati syndrome phenotypes. Laboratory tests confirmed the endocrine perturbance in affected individuals. To find out the underlying genetic change, whole-exome sequencing was carried out.

resultAnalysis of the exome data identified a splicing-site deletion NM_025000.3:c.1423-1_1425delGACA in DCAF17 gene. Sanger sequencing confirmed the co-segregation of the variant with the disease phenotypes in the family.

conclusionThe variant is predicted to cause aberrant splicing, i.e., exon skipping, resulting in the translation of a truncated functionless protein which results in appearance of typical phenotypic features and clinical laboratory findings of Woodhouse-Sakati syndrome in affected members of the family.

Indexed as

AdolescentAlopeciaArrhythmias, CardiacBasal Ganglia DiseasesChildConsanguinityDiabetes MellitusDNA Mutational AnalysisFaciesFemaleHumansHypogonadismIntellectual DisabilityMaleMutationNuclear ProteinsDCAF17 protein, humanNuclear ProteinsProtein IsoformsUbiquitin-Protein Ligase ComplexesDCAF17splicing-site variantWoodhouse-Sakati syndromeWSS

Identifiers

PMID34877714
PMCPMC8761431
OpenAlexW4200395559

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.