Evidence map›Paper›PMID 34876006›Full record

ArticleBMC microbiology2021

Antagonistic activity of endophytic actinobacteria from native potatoes (Solanum tuberosum subsp. tuberosum L.) against Pectobacterium carotovorum subsp. carotovorum and Pectobacterium atrosepticum.

Natalia Padilla-Gálvez, Paola Luengo-Uribe, Sandra Mancilla, Amandine Maurin, Claudia Torres, Pamela Ruiz, Andrés France, Ivette Acuña, Homero Urrutia

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Natalia Padilla-GálvezLaboratorio de Biopelículas y Microbiología Ambiental, Centro de Biotecnología, Universidad de Concepción, Victor Lamas 1290, P.O. Box: 160 C, Concepción, Chile.
Paola Luengo-UribeLaboratorio de Biopelículas y Microbiología Ambiental, Centro de Biotecnología, Universidad de Concepción, Victor Lamas 1290, P.O. Box: 160 C, Concepción, Chile.
Sandra MancillaInstituto de Investigaciones Agropecuarias, INIA Remehue. Ruta 5 Norte Km 8-, Osorno, Región de Los Lagos, Chile.
Amandine MaurinLaboratorio de Biopelículas y Microbiología Ambiental, Centro de Biotecnología, Universidad de Concepción, Victor Lamas 1290, P.O. Box: 160 C, Concepción, Chile.
Claudia TorresLaboratorio de Biopelículas y Microbiología Ambiental, Centro de Biotecnología, Universidad de Concepción, Victor Lamas 1290, P.O. Box: 160 C, Concepción, Chile.
Pamela RuizLaboratorio de Biopelículas y Microbiología Ambiental, Centro de Biotecnología, Universidad de Concepción, Victor Lamas 1290, P.O. Box: 160 C, Concepción, Chile.
Andrés FranceInstituto de Investigaciones Agropecuarias, INIA Quilamapu, Región de Ñuble, Chillán, Chile.
Ivette AcuñaInstituto de Investigaciones Agropecuarias, INIA Remehue. Ruta 5 Norte Km 8-, Osorno, Región de Los Lagos, Chile.
Homero UrrutiaLaboratorio de Biopelículas y Microbiología Ambiental, Centro de Biotecnología, Universidad de Concepción, Victor Lamas 1290, P.O. Box: 160 C, Concepción, Chile. hurrutia@udec.cl.
University of Concepción · CLInstituto de Investigaciones Agropecuarias · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe native potatoes (Solanum tuberosum subsp. tuberosum L.) grown in Chile (Chiloé) represent a new, unexplored source of endophytes to find potential biological control agents for the prevention of bacterial diseases, like blackleg and soft rot, in potato crops.

resultThe objective of this study was the selection of endophytic actinobacteria from native potatoes for antagonistic activity against Pectobacterium carotovorum subsp. carotovorum and Pectobacterium atrosepticum, and their potential to suppress tissue maceration symptoms in potato tubers. This potential was determined through the quorum quenching activity using a Chromobacterium violaceaum ATCC 12472 Wild type (WT) bioassay and its colonization behavior of the potato plant root system (S. tuberosum) by means of the Double labeling of oligonucleotide probes for fluorescence in situ hybridization (DOPE-FISH) targeting technique. The results showed that although Streptomyces sp. TP199 and Streptomyces sp. A2R31 were able to inhibit the growth of the pathogens, only the Streptomyces sp. TP199 isolate inhibited Pectobacterium sp. growth and diminished tissue maceration in tubers (p ≤ 0.05). Streptomyces sp. TP199 had metal-dependent acyl homoserine lactones (AHL) quorum quenching activity in vitro and was able to colonize the root endosphere 10 days after inoculation.

conclusionsWe concluded that native potatoes from southern Chile possess endophyte actinobacteria that are potential agents for the disease management of soft rot and blackleg.

Indexed as

ActinobacteriaAntibiosisBiological Control AgentsChileEndophytesPectobacteriumPlant DiseasesPlant TubersQuorum SensingSolanum tuberosumStreptomycesBiological Control AgentsBlacklegConfocal laser microscopyEndophytic actinobacteriaPotatoQuorum quenchingSoft rotStreptomyces sp.

Identifiers

PMID34876006
PMCPMC8650274
OpenAlexW4200261847

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.