Evidence map›Paper›PMID 34874976›Full record

ArticlePLoS pathogens2021

Cerebrospinal fluid CD4+ T cell infection in humans and macaques during acute HIV-1 and SHIV infection.

Vishakha Sharma, Matthew Creegan, Andrey Tokarev, Denise Hsu, Bonnie M Slike, Carlo Sacdalan, Phillip Chan, Serena Spudich, Jintanat Ananworanich, Michael A Eller and 4 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Vishakha SharmaMilitary HIV Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.
Matthew CreeganMilitary HIV Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.ORCID 0000-0002-4205-466X
Andrey TokarevMilitary HIV Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.ORCID 0000-0002-2616-691X
Denise HsuMilitary HIV Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.ORCID 0000-0001-7530-0508
Bonnie M SlikeMilitary HIV Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.ORCID 0000-0003-4132-4637
Carlo SacdalanInstitute of HIV Research and Innovation, Bangkok, Thailand.ORCID 0000-0002-5839-4837
Phillip ChanInstitute of HIV Research and Innovation, Bangkok, Thailand.ORCID 0000-0002-4071-4409
Serena SpudichDepartment of Neurology, Yale University, New Haven, Connecticut, United States of America.ORCID 0000-0001-6032-3950
Jintanat AnanworanichMilitary HIV Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.
Michael A EllerMilitary HIV Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.
Shelly J KrebsMilitary HIV Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.ORCID 0000-0003-1136-1760
Sandhya VasanMilitary HIV Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.
Diane L BoltonMilitary HIV Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.ORCID 0000-0003-1897-499X
RV254/SEARCH010 and RV304/SEARCH013 Study Teams
Henry M. Jackson Foundation · USHIV Netherlands Australia Thailand Research Collaboration · THYale University · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Critical Role of Cytotoxic T Cells in HIV NeuropathogenesisR01MH106466 · NIMH · OREGON HEALTH & SCIENCE UNIVERSITY · PI PICKER, LOUIS J., SPUDICH, SERENA S · 2016 to 2020
$2.8M
Therapeutic Interventions during Acute Infection to Address the CNS Reservoir forR01NS084911 · NINDS · YALE UNIVERSITY · PI ANANWORANICH, JINTANAT, SPUDICH, SERENA S · 2013 to 2017
$2.3M
NCATS NIH HHS UL1 TR001863NIMH NIH HHS R01 MH106466NINDS NIH HHS R01 NS084911
6 · The paper itself

Abstract

HIV-1 replication within the central nervous system (CNS) impairs neurocognitive function and has the potential to establish persistent, compartmentalized viral reservoirs. The origins of HIV-1 detected in the CNS compartment are unknown, including whether cells within the cerebrospinal fluid (CSF) produce virus. We measured viral RNA+ cells in CSF from acutely infected macaques longitudinally and people living with early stages of acute HIV-1. Active viral transcription (spliced viral RNA) was present in CSF CD4+ T cells as early as four weeks post-SHIV infection, and among all acute HIV-1 specimens (N = 6; Fiebig III/IV). Replication-inactive CD4+ T cell infection, indicated by unspliced viral RNA in the absence of spliced viral RNA, was even more prevalent, present in CSF of >50% macaques and human CSF at ~10-fold higher frequency than productive infection. Infection levels were similar between CSF and peripheral blood (and lymph nodes in macaques), indicating comparable T cell infection across these compartments. In addition, surface markers of activation were increased on CSF T cells and monocytes and correlated with CSF soluble markers of inflammation. These studies provide direct evidence of HIV-1 replication in CD4+ T cells and broad immune activation in peripheral blood and the CNS during acute infection, likely contributing to early neuroinflammation and reservoir seeding. Thus, early initiation of antiretroviral therapy may not be able to prevent establishment of CNS viral reservoirs and sources of long-term inflammation, important targets for HIV-1 cure and therapeutic strategies.

Indexed as

AnimalsCD4-Positive T-LymphocytesCentral Nervous SystemCerebrospinal FluidHIV-1HIV InfectionsHumansMacaca mulattaRNA, ViralSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusRNA, Viral

Identifiers

PMID34874976
PMCPMC8683024
OpenAlexW4200464142

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.