Evidence map›Paper›PMID 34874820›Full record

ArticleMicrobial genomics2021

Chemical biology-whole genome engineering datasets predict new antibacterial combinations.

Arthur K Turner, Muhammad Yasir, Sarah Bastkowski, Andrea Telatin, Andrew Page, Mark Webber, Ian Charles

Open access · goldAbstract read
In one paragraph

Article in Microbial genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Tazobactam selects for multidrug resistance.npj antimicrobials and resistance · 2025
    Article
  6. Article
  7. Article
  8. Genome-Wide Analysis of Innate Susceptibility Mechanisms ofAntibiotics (Basel, Switzerland) · 2022
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Arthur K TurnerQuadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK.
Muhammad YasirQuadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK.
Sarah BastkowskiQuadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK.
Andrea TelatinQuadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK.
Andrew PageQuadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK.
Mark WebberQuadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK.
Ian CharlesQuadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK.
Norwich Research Park · GBUniversity of East Anglia · GB

Funding

Biotechnology and Biological Sciences Research Council BB/R012504/1Medical Research Council MR/L015080/1Medical Research Council MR/T030062/1
6 · The paper itself

Abstract

Trimethoprim and sulfamethoxazole are used commonly together as cotrimoxazole for the treatment of urinary tract and other infections. The evolution of resistance to these and other antibacterials threatens therapeutic options for clinicians. We generated and analysed a chemical-biology-whole-genome data set to predict new targets for antibacterial combinations with trimethoprim and sulfamethoxazole. For this we used a large transposon mutant library in

Indexed as

Anti-Bacterial AgentsDrug SynergismDrug Therapy, CombinationEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialGene LibraryGene SilencingHumansMicrobial Sensitivity TestsMutagenesis, InsertionalMutagenesis, Site-DirectedSulfamethoxazoleTrimethoprimWhole Genome SequencingAnti-Bacterial AgentsEscherichia coli ProteinsSulfamethoxazoleTrimethoprimantibioticschemicalcombinationsgenomicsTISTraDIS

Identifiers

PMID34874820
PMCPMC8767339
OpenAlexW4200608096

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.