Evidence map›Paper›PMID 34874500›Full record

ArticleRice (New York, N.Y.)2021

Identification of QTL Combinations that Cause Spikelet Sterility in Rice Derived from Interspecific Crosses.

Chang-Min Lee, Jung-Pil Suh, Hyun-Su Park, Man-Kee Baek, O-Young Jeong, Song-Joong Yun, Young-Chan Cho, Suk-Man Kim

Open access · goldAbstract read
In one paragraph

Article in Rice (New York, N.Y.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Chang-Min LeeCrop Breeding Division, National Institute of Crop Science, Rural Development Administration, Wanju, Republic of Korea.
Jung-Pil SuhCrop Breeding Division, National Institute of Crop Science, Rural Development Administration, Wanju, Republic of Korea.
Hyun-Su ParkCrop Breeding Division, National Institute of Crop Science, Rural Development Administration, Wanju, Republic of Korea.
Man-Kee BaekCrop Breeding Division, National Institute of Crop Science, Rural Development Administration, Wanju, Republic of Korea.
O-Young JeongCrop Breeding Division, National Institute of Crop Science, Rural Development Administration, Wanju, Republic of Korea.
Song-Joong YunDepartment of Crop Science and Biotechnology, Jeonbuk National University, Jeonju, Republic of Korea.
Young-Chan ChoCrop Breeding Division, National Institute of Crop Science, Rural Development Administration, Wanju, Republic of Korea.
Suk-Man KimCrop Breeding Division, National Institute of Crop Science, Rural Development Administration, Wanju, Republic of Korea. s_kim@knu.ac.kr.ORCID http://orcid.org/0000-0002-6701-4824
Rural Development Administration · KRJeonbuk National University · KR

Funding

cooperative research program for agricultural science & technology development PJ01480402
6 · The paper itself

Abstract

backgroundThe exploitation of useful genes through interspecific and intersubspecific crosses has been an important strategy for the genetic improvement of rice. Postzygotic reproductive isolation routinely occurs to hinder the growth of pollen or embryo sacs during the reproductive development of the wide crosses.

resultIn this study, we investigated the genetic relationship between the hybrid breakdown of the population and transferred resistance genes derived from wide crosses using a near-isogenic population composed of 225 lines. Five loci (qSS12, qSS8, qSS11, ePS6-1, and ePS6-2) associated with spikelet fertility (SF) were identified by QTL and epistatic analysis, and two out of five epistasis interactions were found between the three QTLs (qSS12, qSS8 and qSS11) and background marker loci (ePS6-1 and ePS6-2) on chromosome 6. The results of the QTL combinations suggested a genetic model that explains most of the interactions between spikelet fertility and the detected loci with positive or negative effects. Moreover, the major-effect QTLs, qSS12 and qSS8, which exhibited additive gene effects, were narrowed down to 82- and 200-kb regions on chromosomes 12 and 8, respectively. Of the 13 ORFs present in the target regions, Os12g0589400 and Os12g0589898 for qSS12 and OS8g0298700 for qSS8 induced significantly different expression levels of the candidate genes in rice at the young panicle stage.

conclusionThe results will be useful for obtaining a further understanding of the mechanism causing the hybrid breakdown of a wide cross and will provide new information for developing rice cultivars with wide compatibility.

Indexed as

Hybrid breakdownInterspecies crossQTLRiceSpikelet fertilitySpikelet sterility

Identifiers

PMID34874500
PMCPMC8651928
OpenAlexW4200403524

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.