Evidence map›Paper›PMID 34873300›Full record

ArticleLeukemia2022

Focal disruption of DNA methylation dynamics at enhancers in IDH-mutant AML cells.

Elisabeth R Wilson, Nichole M Helton, Sharon E Heath, Robert S Fulton, Jacqueline E Payton, John S Welch, Matthew J Walter, Peter Westervelt, John F DiPersio, Daniel C Link and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Leukemia, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
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  15. Cancers · 2023
    Review
  16. Article
  17. Review
  18. Distinct and opposite effects of leukemogenicProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Elisabeth R WilsonDepartment of Medicine, Division of Oncology, Section of Stem Cell Biology, Washington University, St. Louis, MO, USA.
Nichole M HeltonDepartment of Medicine, Division of Oncology, Section of Stem Cell Biology, Washington University, St. Louis, MO, USA.
Sharon E HeathDepartment of Medicine, Division of Oncology, Section of Stem Cell Biology, Washington University, St. Louis, MO, USA.
Robert S FultonMcDonnell Genome Institute, Washington University, St. Louis, MO, USA.
Jacqueline E PaytonDepartment of Pathology and Immunology, Washington University, St. Louis, MO, USA.ORCID http://orcid.org/0000-0001-8832-3661
John S WelchDepartment of Medicine, Division of Oncology, Section of Stem Cell Biology, Washington University, St. Louis, MO, USA.
Matthew J WalterDepartment of Medicine, Division of Oncology, Section of Stem Cell Biology, Washington University, St. Louis, MO, USA.ORCID http://orcid.org/0000-0002-7753-1091
Peter WesterveltDepartment of Medicine, Division of Oncology, Section of Stem Cell Biology, Washington University, St. Louis, MO, USA.
John F DiPersioDepartment of Medicine, Division of Oncology, Section of Stem Cell Biology, Washington University, St. Louis, MO, USA.ORCID http://orcid.org/0000-0002-0429-3133
Daniel C LinkDepartment of Medicine, Division of Oncology, Section of Stem Cell Biology, Washington University, St. Louis, MO, USA.ORCID http://orcid.org/0000-0002-3170-7581
Christopher A MillerDepartment of Medicine, Division of Oncology, Section of Stem Cell Biology, Washington University, St. Louis, MO, USA.
Timothy J LeyDepartment of Medicine, Division of Oncology, Section of Stem Cell Biology, Washington University, St. Louis, MO, USA.ORCID http://orcid.org/0000-0002-9913-0520
David H SpencerDepartment of Medicine, Division of Oncology, Section of Stem Cell Biology, Washington University, St. Louis, MO, USA. dspencer@wustl.edu.ORCID http://orcid.org/0000-0002-5314-3043
Washington University in St. Louis · USJames S. McDonnell Foundation · US

Funding

Specimen Acquistition and Expression ProfilingP01CA101937 · NCI · WASHINGTON UNIVERSITY · PI LEY, TIMOTHY J. · 2003 to 2023
$58.8M
Targeting the Bone Marrow Microenvironment In Acute Lymphocytic LeukemiaP50CA171963 · NCI · WASHINGTON UNIVERSITY · PI TODD A FEHNIGER · 2013 to 2026
$31.6M
Molecular Pathogenesis of Acute Myeloid LeukemiaR35CA197561 · NCI · WASHINGTON UNIVERSITY · PI Timothy J. Ley · 2015 to 2026
$11.0M
Dysregulated genome architecture in acute myeloid leukemiaR37CA259359 · NCI · WASHINGTON UNIVERSITY · PI David H Spencer · 2022 to 2026
$1.8M
COMPREHENSIVE INFORMATIC ANALYSES OF AML GENOMES AND EPIGENOMESR50CA211782 · NCI · WASHINGTON UNIVERSITY · PI Christopher A Miller · 2017 to 2026
$1.5M
REGULATORY MECHANISMS OF HOX GENE EXPRESSION IN ACUTE MYELOID LEUKEMIAK08CA190815 · NCI · WASHINGTON UNIVERSITY · PI SPENCER, DAVID H · 2015 to 2019
$831k
NCI NIH HHS K08 CA190815NCI NIH HHS P01 CA101937NCI NIH HHS P50 CA171963NCI NIH HHS R35 CA197561NCI NIH HHS R37 CA259359NCI NIH HHS R50 CA211782
6 · The paper itself

Abstract

Recurrent mutations in IDH1 or IDH2 in acute myeloid leukemia (AML) are associated with increased DNA methylation, but the genome-wide patterns of this hypermethylation phenotype have not been comprehensively studied in AML samples. We analyzed whole-genome bisulfite sequencing data from 15 primary AML samples with IDH1 or IDH2 mutations, which identified ~4000 focal regions that were uniquely hypermethylated in IDH

Indexed as

DNA MethylationLeukemia, Myeloid, AcuteHumansIsocitrate DehydrogenaseMutationRegulatory Sequences, Nucleic AcidIsocitrate Dehydrogenase

Identifiers

PMID34873300
PMCPMC8979817
OpenAlexW4200058484

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.