Evidence map›Paper›PMID 34873233›Full record

ArticleScientific reports2021

Peptides derived from gp43, the most antigenic protein from Paracoccidioides brasiliensis, form amyloid fibrils in vitro: implications for vaccine development.

Thyago R Cardim-Pires, Ricardo Sant'Anna, Debora Foguel

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. LambdaPP: Fast and accessible protein-specific phenotype predictions.Protein science : a publication of the Protein Society · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Thyago R Cardim-PiresInstituto de Bioquímica Médica Leopoldo de Meis, Universidade Federal do Rio de Janeiro - Centro de Ciências da Saúde, Av. Carlos Chagas Filho 373, Bloco E, sala 42, Ilha do Fundão, Rio de Janeiro, RJ, CEP 21941-902, Brazil.
Ricardo Sant'AnnaInstituto de Bioquímica Médica Leopoldo de Meis, Universidade Federal do Rio de Janeiro - Centro de Ciências da Saúde, Av. Carlos Chagas Filho 373, Bloco E, sala 42, Ilha do Fundão, Rio de Janeiro, RJ, CEP 21941-902, Brazil. santanna@bioqmed.ufrj.br.
Debora FoguelInstituto de Bioquímica Médica Leopoldo de Meis, Universidade Federal do Rio de Janeiro - Centro de Ciências da Saúde, Av. Carlos Chagas Filho 373, Bloco E, sala 42, Ilha do Fundão, Rio de Janeiro, RJ, CEP 21941-902, Brazil. foguel@bioqmed.ufrj.br.
Universidade Federal do Rio de Janeiro · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fungal infection is an important health problem in Latin America, and in Brazil in particular. Paracoccidioides (mainly P. brasiliensis and P. lutzii) is responsible for paracoccidioidomycosis, a disease that affects mainly the lungs. The glycoprotein gp43 is involved in fungi adhesion to epithelial cells, which makes this protein an interesting target of study. A specific stretch of 15 amino acids that spans the region 181-195 (named P10) of gp43 is an important epitope of gp43 that is being envisioned as a vaccine candidate. Here we show that synthetic P10 forms typical amyloid aggregates in solution in very short times, a property that could hamper vaccine development. Seeds obtained by fragmentation of P10 fibrils were able to induce the aggregation of P4, but not P23, two other peptides derived from gp43. In silico analysis revealed several regions within the P10 sequence that can form amyloid with steric zipper architecture. Besides, in-silico proteolysis studies with gp43 revealed that aggregation-prone, P10-like peptides could be generated by several proteases, which suggests that P10 could be formed under physiological conditions. Considering our data in the context of a potential vaccine development, we redesigned the sequence of P10, maintaining the antigenic region (HTLAIR), but drastically reducing its aggregation propensity.

Indexed as

AlgorithmsAmyloidAnimalsAntigensAntigens, FungalAntigens, NeoplasmCircular DichroismComputational BiologyComputer SimulationEpitopesFungal ProteinsFungal VaccinesGlycoproteinsHumansIn Vitro TechniquesParacoccidioidesAmyloidAntigensAntigens, FungalAntigens, NeoplasmEpitopesFungal ProteinsFungal VaccinesGlycoproteinsPeptidesSolventstumor-associated antigen, gp43

Identifiers

PMID34873233
PMCPMC8648789
OpenAlexW4225747504

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.