Evidence map›Paper›PMID 34873174›Full record

ArticleNature communications2021

Proximal and distal effects of genetic susceptibility to multiple sclerosis on the T cell epigenome.

Tina Roostaei, Hans-Ulrich Klein, Yiyi Ma, Daniel Felsky, Pia Kivisäkk, Sarah M Connor, Alexandra Kroshilina, Christina Yung, Belinda J Kaskow, Xiaorong Shao and 9 more

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Observational
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Epigenetic control of ataxin-1 in multiple sclerosis.Annals of clinical and translational neurology · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Association ofInternational journal of endocrinology · 2022
    Article
  13. Specific hypomethylation programs underpin B cell activation in early multiple sclerosis.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Tina RoostaeiCenter for Translational and Computational Neuroimmunology, Department of Neurology and the Taub Institute for Research on Alzheimer's disease and the Aging brain, Columbia University Irving Medical Center, New York, NY, USA.
Hans-Ulrich KleinCenter for Translational and Computational Neuroimmunology, Department of Neurology and the Taub Institute for Research on Alzheimer's disease and the Aging brain, Columbia University Irving Medical Center, New York, NY, USA.ORCID http://orcid.org/0000-0002-6382-9428
Yiyi MaCenter for Translational and Computational Neuroimmunology, Department of Neurology and the Taub Institute for Research on Alzheimer's disease and the Aging brain, Columbia University Irving Medical Center, New York, NY, USA.ORCID http://orcid.org/0000-0002-3609-8877
Daniel FelskyKrembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, University of Toronto, Toronto, ON, Canada.ORCID http://orcid.org/0000-0003-1831-9848
Pia KivisäkkAlzheimer's Clinical and Translational Research Unit, Department of Neurology, Massachusetts General Hospital, Boston, MA, USA.
Sarah M ConnorCenter for Translational and Computational Neuroimmunology, Department of Neurology and the Taub Institute for Research on Alzheimer's disease and the Aging brain, Columbia University Irving Medical Center, New York, NY, USA.
Alexandra KroshilinaCenter for Translational and Computational Neuroimmunology, Department of Neurology and the Taub Institute for Research on Alzheimer's disease and the Aging brain, Columbia University Irving Medical Center, New York, NY, USA.
Christina YungCenter for Translational and Computational Neuroimmunology, Department of Neurology and the Taub Institute for Research on Alzheimer's disease and the Aging brain, Columbia University Irving Medical Center, New York, NY, USA.
Belinda J KaskowAnn Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Xiaorong ShaoGenetic Epidemiology and Genomics Laboratory, University of California, Berkeley, CA, USA.
Brooke RheadGenetic Epidemiology and Genomics Laboratory, University of California, Berkeley, CA, USA.
José M OrdovásJean Mayer US Department of Agriculture Human Nutrition Research Center on Aging, Tufts University, Boston, MA, USA.ORCID http://orcid.org/0000-0002-7581-5680
Devin M AbsherHudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
Donna K ArnettCollege of Public Health, University of Kentucky, Lexington, KY, USA.ORCID http://orcid.org/0000-0003-2219-657X
Jia LiuAdvanced Science Research Center at the Graduate Center, Neuroscience Initiative, City University of New York, New York, NY, USA.ORCID http://orcid.org/0000-0001-6274-2710
Nikolaos PatsopoulosAnn Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Lisa F BarcellosGenetic Epidemiology and Genomics Laboratory, University of California, Berkeley, CA, USA.
Howard L WeinerAnn Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0003-0203-9681
Philip L De JagerCenter for Translational and Computational Neuroimmunology, Department of Neurology and the Taub Institute for Research on Alzheimer's disease and the Aging brain, Columbia University Irving Medical Center, New York, NY, USA. pld2115@cumc.columbia.edu.ORCID http://orcid.org/0000-0002-8057-2505

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identifying the effects of genetic variation on the epigenome in disease-relevant cell types can help advance our understanding of the first molecular contributions of genetic susceptibility to disease onset. Here, we establish a genome-wide map of DNA methylation quantitative trait loci in CD4

Indexed as

DNA MethylationAdolescentAdultCD4-Positive T-LymphocytesCells, CulturedEpigenomeFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHaplotypesHumansMaleMiddle AgedMultiple SclerosisPolymorphism, Single Nucleotide

Identifiers

PMID34873174
PMCPMC8648735

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.