Evidence map›Paper›PMID 34872347›Full record

ArticlemBio2021

Cargo Genes of Tn

Sean Benler, Guilhem Faure, Han Altae-Tran, Sergey Shmakov, Feng Zheng, Eugene Koonin

Erratum issuedAbstract read
In one paragraph

Article in mBio, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Why do bacteria accumulate antiphage defence systems?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  10. Article
  11. Article
  12. Article
  13. Exploring Mobile Genetic Elements in Vibrio cholerae.Genome biology and evolution · 2025
    Article
  14. Mutational Analysis of Colistin-ResistantPathogens (Basel, Switzerland) · 2025
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Sean BenlerNational Center for Biotechnology Information, National Library of Medicine, Bethesda, Maryland, USA.ORCID 0000-0001-7985-1294
Guilhem FaureBroad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Han Altae-TranBroad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Sergey ShmakovNational Center for Biotechnology Information, National Library of Medicine, Bethesda, Maryland, USA.
Feng ZhengBroad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Eugene KooninNational Center for Biotechnology Information, National Library of Medicine, Bethesda, Maryland, USA.ORCID 0000-0003-3943-8299

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transposition is a major mechanism of horizontal gene mobility in prokaryotes. However, exploration of the genes mobilized by transposons (cargo) is hampered by the difficulty in delineating integrated transposons from their surrounding genetic context. Here, we present a computational approach that allowed us to identify the boundaries of 6,549 Tn

Indexed as

DNA Transposable ElementsDrug Resistance, BacterialAnti-Bacterial AgentsBacteriaBacterial ProteinsPhylogenyRecombination, GeneticAnti-Bacterial AgentsBacterial ProteinsDNA Transposable Elementscargo genesTn7transposasestransposon endstransposons

Identifiers

PMID34872347
PMCPMC8649781

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.