Evidence map›Paper›PMID 34871295›Full record

ArticlePLoS biology2021

A crowdsourcing open platform for literature curation in UniProt.

Yuqi Wang, Qinghua Wang, Hongzhan Huang, Wei Huang, Yongxing Chen, Peter B McGarvey, Cathy H Wu, Cecilia N Arighi, UniProt Consortium

Abstract read
In one paragraph

Article in PLoS biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed.

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11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yuqi WangProtein Information Resource, University of Delaware, Newark, Delaware, United States of America.ORCID 0000-0002-1703-3058
Qinghua WangProtein Information Resource, University of Delaware, Newark, Delaware, United States of America.
Hongzhan HuangProtein Information Resource, University of Delaware, Newark, Delaware, United States of America.
Wei HuangCollege of Agriculture and Natural Resource, University of Delaware, Newark, Delaware, United States of America.ORCID 0000-0003-0132-6670
Yongxing ChenProtein Information Resource, University of Delaware, Newark, Delaware, United States of America.
Peter B McGarveyProtein Information Resource, Georgetown University Medical Center, District of Columbia, United States of America.ORCID 0000-0002-8312-6017
Cathy H WuProtein Information Resource, University of Delaware, Newark, Delaware, United States of America.ORCID 0000-0001-6379-8601
Cecilia N ArighiProtein Information Resource, University of Delaware, Newark, Delaware, United States of America.ORCID 0000-0002-0803-4817
UniProt Consortium

Funding

UniProt - Text Mining and Large Language models to Enhance Functional Annotation in UniProt of Protein Variants Associated with Alzheimer's DiseaseU24HG007822 · NHGRI · GEORGETOWN UNIVERSITY · PI Alex Bateman, Alan James Bridge · 2018 to 2026
$53.0M
NHGRI NIH HHS U24 HG007822
6 · The paper itself

Abstract

The UniProt knowledgebase is a public database for protein sequence and function, covering the tree of life and over 220 million protein entries. Now, the whole community can use a new crowdsourcing annotation system to help scale up UniProt curation and receive proper attribution for their biocuration work.

Indexed as

Amino Acid SequenceComputational BiologyCrowdsourcingDatabases, ProteinData CurationHumansLiteratureMolecular Sequence AnnotationProteinsStakeholder ParticipationProteins

Identifiers

PMID34871295
PMCPMC8675915

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.