Evidence map›Paper›PMID 34869944›Full record

ArticleJACC. Basic to translational science2021

MLb-LDLr: A Machine Learning Model for Predicting the Pathogenicity of

Asier Larrea-Sebal, Asier Benito-Vicente, José A Fernandez-Higuero, Shifa Jebari-Benslaiman, Unai Galicia-Garcia, Kepa B Uribe, Ana Cenarro, Helena Ostolaza, Fernando Civeira, Sonia Arrasate and 2 more

Open access · goldAbstract read
In one paragraph

Article in JACC. Basic to translational science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. MLe-KCNQ2: An Artificial Intelligence Model for the Prognosis of MissenseInternational journal of molecular sciences · 2024
    Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Continuous Bayesian variant interpretation accounts for incomplete penetrance among Mendelian cardiac channelopathies.Genetics in medicine : official journal of the American College of Medical Genetics · 2023
    Article
  9. Review
  10. Applications of machine learning in familial hypercholesterolemia.Frontiers in cardiovascular medicine · 2023
    Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 1 country.

Asier Larrea-SebalFundación Biofísica Bizkaia, Leioa, Spain.
Asier Benito-VicenteInstituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, Spain.
José A Fernandez-HigueroDepartment of Biochemistry and Molecular Biology, University of the Basque Country, Leioa, Spain.
Shifa Jebari-BenslaimanInstituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, Spain.
Unai Galicia-GarciaFundación Biofísica Bizkaia, Leioa, Spain.
Kepa B UribeCenter for Cooperative Research in Biomaterials (CIC biomaGUNE), Basque Research and Technology Alliance (BRTA), Donostia San Sebastián, Spain.
Ana CenarroLipid Unit, Hospital Universitario Miguel Servet, IIS Aragon, CIBERCV, Universidad de Zaragoza, Spain.
Helena OstolazaInstituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, Spain.
Fernando CiveiraLipid Unit, Hospital Universitario Miguel Servet, IIS Aragon, CIBERCV, Universidad de Zaragoza, Spain.
Sonia ArrasateDepartment of Organic and Inorganic Chemistry, University of Basque Country UPV/EHU, Leioa, Spain.
Humberto González-DíazInstituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, Spain.
César MartínInstituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, Spain.
University of the Basque Country · ESBiofisika · ESCIC biomaGUNE · ESFundación Biofísica Bizkaia · ESHospital Universitario Miguel Servet · ESInstituto de Investigación Sanitaria Aragón · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Untreated familial hypercholesterolemia (FH) leads to atherosclerosis and early cardiovascular disease. Mutations in the low-density lipoprotein receptor (

Indexed as

ANN, artificial neural networkAUROC, area under the receiver operating curveEGS, expert-guided selectionESEA, Excel Solver Evolutionary algorithmfamilial hypercholesterolemiaFH, familial hypercholesterolemiaLDA, linear discriminant analysisLDL, low-density lipoproteinLDL receptorLDLr, low-density lipoprotein receptorLNN, linear neural networksmachine learning softwareMLb-LDLr, machine-learning–based low-density lipoprotein receptor softwareML, machine learningMLP, multilayer perceptronpathogenicitypredictionRBF, radial basis functionUTR, untranslated region

Identifiers

PMID34869944
PMCPMC8617597
OpenAlexW3216889685

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.