Evidence map›Paper›PMID 34868058›Full record

ArticleFrontiers in immunology2021

A Model of Minor Histocompatibility Antigens in Allogeneic Hematopoietic Cell Transplantation.

Paul J Martin, David M Levine, Barry E Storer, Xiuwen Zheng, Deepti Jain, Ben Heavner, Brandon M Norris, Daniel E Geraghty, Stephen R Spellman, Cassie L Sather and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Milestones in acute GVHD pathophysiology.Frontiers in immunology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Paul J MartinClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States.
David M LevineDepartment of Biostatistics, University of Washington, Seattle, WA, United States.
Barry E StorerClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States.
Xiuwen ZhengDepartment of Biostatistics, University of Washington, Seattle, WA, United States.
Deepti JainDepartment of Biostatistics, University of Washington, Seattle, WA, United States.
Ben HeavnerDepartment of Biostatistics, University of Washington, Seattle, WA, United States.
Brandon M NorrisClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States.
Daniel E GeraghtyClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States.
Stephen R SpellmanCenter for International Blood and Marrow Transplant Research, National Marrow Donor Program, Minneapolis, MN, United States.
Cassie L SatherGenomics & Bioinformatics Shared Resource, Fred Hutchinson Cancer Research Center, Seattle, WA, United States.
Feinan WuGenomics & Bioinformatics Shared Resource, Fred Hutchinson Cancer Research Center, Seattle, WA, United States.
John A HansenClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States.
Fred Hutch Cancer Center · USUniversity of Washington · USNational Marrow Donor Program · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
VIRUS-MEDIATED MYELOSUPPRESSIONP01CA018029 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STEPHANIE J LEE · 1985 to 2026
$128.4M
Data Resource for Analyzing Blood &Marrow TransplantsU24CA076518 · NCI · MEDICAL COLLEGE OF WISCONSIN · PI Amy M Moskop, Bronwen Shaw · 1998 to 2026
$105.2M
TRANSPLANTATION IMMUNOLOGYP01AI033484 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MARTIN, PAUL J · 1992 to 2013
$13.1M
Whole Genome Association Analysis of Hematopoietic Cell Transplant (HCT) OutcomeR01HL105914 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MARTIN, PAUL J · 2011 to 2019
$9.8M
Whole Genome Association Analysis of Hematopoietic Cell Transplant OutcomeR01HL087690 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HANSEN, JOHN ANDREW · 2006 to 2008
$4.1M
Genetic Analysis of Airflow Obstruction After Stem Cell TransplantationR01HL088201 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI CLARK, JOAN G. · 2008 to 2013
$2.2M
Biomarker Discovery in Chronic Graft-vs-Host DiseaseR01HL094260 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HANSEN, JOHN ANDREW · 2008 to 2011
$1.8M
NCI NIH HHS P01 CA018029NCI NIH HHS P30 CA015704NCI NIH HHS U24 CA076518NHLBI NIH HHS R01 HL087690NHLBI NIH HHS R01 HL088201NHLBI NIH HHS R01 HL094260NHLBI NIH HHS R01 HL105914NIAID NIH HHS P01 AI033484
6 · The paper itself

Abstract

Minor histocompatibility antigens (mHAg) composed of peptides presented by HLA molecules can cause immune responses involved in graft-versus-host disease (GVHD) and graft-versus-leukemia effects after allogeneic hematopoietic cell transplantation (HCT). The current study was designed to identify individual graft-versus-host genomic mismatches associated with altered risks of acute or chronic GVHD or relapse after HCT between HLA-genotypically identical siblings. Our results demonstrate that in allogeneic HCT between a pair of HLA-identical siblings, a mHAg manifests as a set of peptides originating from annotated proteins and non-annotated open reading frames, which i) are encoded by a group of highly associated recipient genomic mismatches, ii) bind to HLA allotypes in the recipient, and iii) evoke a donor immune response. Attribution of the immune response and consequent clinical outcomes to individual peptide components within this set will likely differ from patient to patient according to their HLA types.

Indexed as

Hematopoietic Stem Cell TransplantationTransplantation ImmunologyAdolescentAdultAgedAllelesChildChild, PreschoolDisease SusceptibilityFemaleGenetic Predisposition to DiseaseGenetic VariationGraft vs Host DiseaseHLA AntigensHumansIncidenceHLA AntigensMinor Histocompatibility AntigensPeptidesgenetic variationgraft-versus-host diseasehematopoietic cell transplantationminor histocompatibility antigenssingle nucleotide polymorphisms (SNPs)

Identifiers

PMID34868058
PMCPMC8636906
OpenAlexW3212598664

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.