Evidence map›Paper›PMID 34865198›Full record

ArticleJournal of microbiology (Seoul, Korea)2021

Lactiplantibacillus plantarum LRCC5314 includes a gene for serotonin biosynthesis via the tryptophan metabolic pathway.

Jiseon Jeong, Yunjeong Lee, Seokmin Yoon, Jong-Hwa Kim, Wonyong Kim

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Article in Journal of microbiology (Seoul, Korea), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
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  5. Whole-Genome Sequence ofMicroorganisms · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jiseon Jeong *Department of Microbiology, Chung-Ang University College of Medicine, Seoul, 06974, Republic of Korea.
Yunjeong Lee *Department of Microbiology, Chung-Ang University College of Medicine, Seoul, 06974, Republic of Korea.
Seokmin Yoon *Department of Microbiology, Chung-Ang University College of Medicine, Seoul, 06974, Republic of Korea.
Jong-Hwa KimDepartment of Microbiology, Chung-Ang University College of Medicine, Seoul, 06974, Republic of Korea.
Wonyong KimDepartment of Microbiology, Chung-Ang University College of Medicine, Seoul, 06974, Republic of Korea. kimwy@cau.ac.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As the functions of probiotics within the same species may not be shared, it is important to analyze the genetic characteristics of strains to determine their safety and usefulness before industrial applications. Hence the present study was undertaken to determine functional genes, and beneficial activities of strain LRCC5314, a bacterial strain isolated from kimchi through comparative genomic analysis. Phylogenetic analysis based on the 16S rRNA gene sequence showed that strain LRCC5314 was a member of the species L. plantarum. Whole genome size of strain LRCC5314 was sequence was 3.25 Mb long, with a G + C content of 44.5 mol% and 3,031 predicted genes. Strain LRCC5314 could metabolize hexoses through homofermentation, which produces only lactic acid from hexoses. According to gene annotation, strain LRCC-5314 contained genes of EPS production and CRISPR. Moreover, the strain contained genes that could encode a complete biosynthetic pathway for the production of tryptophan, which can be used as a precursor of serotonin. Notably, the tryptophan and serotonin activities strain LRCC5314 were higher than those of reference strains, L. plantarum ATCC 14917

Indexed as

Genes, BacterialClustered Regularly Interspaced Short Palindromic RepeatsFermentationFermented FoodsGenome, BacterialLactiplantibacillus plantarumMetabolic Networks and PathwaysMolecular Sequence AnnotationPhylogenyPolysaccharides, BacterialProbioticsSerotoninTryptophanWhole Genome SequencingPolysaccharides, BacterialSerotoninTryptophanLactiplantibacillus plantarum LRCC5314probioticsserotonintryptophanwhole-genome analysis

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.