ArticleThe New phytologist2022
The chromosome-level genome provides insight into the molecular mechanism underlying the tortuous-branch phenotype of Prunus mume.
Article in The New phytologist, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.
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33 citing papers in PubMed.
- Genetic regulation of stem elongation and thickening in ornamental plants: a review.Horticulture research · 2026Article
- Stones in genomic storms: transposable element-driven variation in Prunus fruit trees.Mobile DNA · 2026Review
- The telomere-to-telomere haplotype genome provides in-depth insights into the molecular mechanisms of the anthocyanin deficiency phenotype in Prunus mume.Molecular horticulture · 2026Article
- A NAC family geneHorticulture research · 2025Article
- QTL detection and candidate gene identification for prostrate growth habit in interspecific crosses of wild chrysanthemum (Horticulture research · 2025Article
- Advancing ornamental plant breeding through genomic technologies: opportunities, challenges, and future directions.Functional & integrative genomics · 2025Review
- Topping-induced transcriptome changes reveal PaSPL-mediated regulation of plant architecture in Platanus acerifolia.Plant molecular biology · 2025Article
- Haplotype-resolved genome assembly provides new insights into the genomic origin of purple colour in Prunus mume.Plant biotechnology journal · 2025Article
- Chromosome-level assembly of Prunus serrula Franch genome.Scientific data · 2025Article
- Mapping the genomic landscape ofHorticulture research · 2025Article
- Population sequencing of cherry accessions unravels the evolution of Cerasus species and the selection of genetic characteristics in edible cherries.Molecular horticulture · 2025Article
- The haplotype-phased genome assembly facilitated the deciphering of the bud dormancy-related QTLs in Prunus mume.DNA research : an international journal for rapid publication of reports on genes and genomes · 2024Article
- Article
- Genomic data provides insights into the evolutionary history and adaptive differentiation of two tetraploid strawberries.Horticulture research · 2024Article
- Genome-Wide Analysis of the Gibberellin-Oxidases Family Members in FourInternational journal of molecular sciences · 2024Article
- Haplotype-resolved genome assembly for tetraploid Chinese cherry (Horticulture research · 2024Article
- Chromosome-level genome assembly provides insights into the genetic diversity, evolution, and flower development of Prunus conradinae.Molecular horticulture · 2024Article
- A phased genome of the highly heterozygous 'Texas' almond uncovers patterns of allele-specific expression linked to heterozygous structural variants.Horticulture research · 2024Article
- Comparative population genomics reveals convergent and divergent selection in the apricot-peach-plum-mei complex.Horticulture research · 2024Article
- Bulked Segregant RNA-Seq Reveals Different Gene Expression Patterns and Mutant Genes Associated with the Zigzag Pattern of Tea Plants (International journal of molecular sciences · 2024Article
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Abstract
Plant with naturally twisted branches is referred to as a tortuous-branch plant, which have extremely high ornamental value due to their zigzag shape and the natural twisting of their branches. Prunus mume is an important woody ornamental plant. However, the molecular mechanism underlying this unique trait in Prunus genus is unknown. Here, we present a chromosome-level genome assembly of the cultivated P. mume var. tortuosa created using Oxford Nanopore combined with Hi-C scaffolding, which resulted in a 237.8 Mb genome assembly being anchored onto eight pseudochromosomes. Molecular dating indicated that P. mume is the most recently differentiated species in Prunus. Genes associated with cell division, development and plant hormones play essential roles in the formation of tortuous branch trait. A putative regulatory pathway for the tortuous branch trait was constructed based on gene expression levels. Furthermore, after transferring candidate PmCYCD genes into Arabidopsis thaliana, we found that seedlings overexpressing these genes exhibited curled rosette leaves. Our results provide insights into the evolutionary history of recently differentiated species in Prunus genus, the molecular basis of stem morphology, and the molecular mechanism underlying the tortuous branch trait and highlight the utility of multi-omics in deciphering the properties of P. mume plant architecture.
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