Evidence map›Paper›PMID 34859289›Full record

ArticleHuman genetics2022

Genome-wide analysis of mitochondrial DNA copy number reveals loci implicated in nucleotide metabolism, platelet activation, and megakaryocyte proliferation.

R J Longchamps, S Y Yang, C A Castellani, W Shi, J Lane, M L Grove, T M Bartz, C Sarnowski, C Liu, K Burrows and 42 more

Open access · hybridAbstract read
In one paragraph

Article in Human genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 4 pooled it
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 4 syntheses or guidelines pooled it, 70 citations in OpenAlex.

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  18. The mitochondrial DNA copy number and ovary-related reproductive disorders: A bidirectional two-sample Mendelian randomization study.International journal of gynaecology and obstetrics: the official organ of the International Federation of Gynaecology and Obstetrics · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

52 authors at 20 institutions in 6 countries.

R J Longchamps *Department of Genetic Medicine, McKusick-Nathans Institute, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
S Y Yang *Department of Genetic Medicine, McKusick-Nathans Institute, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0002-6327-0847
C A CastellaniDepartment of Genetic Medicine, McKusick-Nathans Institute, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
W ShiDepartment of Genetic Medicine, McKusick-Nathans Institute, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
J LaneDepartment of Laboratory Medicine and Pathology, University of Minnesota Medical School, Minneapolis, MN, USA.
M L GroveDepartment of Epidemiology, Human Genetics, and Environmental Sciences, School of Public Health, Human Genetics Center, The University of Texas Health Science Center at Houston, Houston, TX, USA.
T M BartzCardiovascular Health Research Unit, Departments of Medicine and Biostatistics, University of Washington, Seattle, WA, USA.
C SarnowskiDepartment of Biostatistics, Boston University School of Public Health, Boston, MA, USA.
C LiuDepartment of Biostatistics, Boston University School of Public Health, Boston, MA, USA.
K BurrowsMRC Integrative Epidemiology Unit at the University of Bristol, University of Bristol, Oakfield House, Oakfield Grove, Bristol, UK.
A L GuyattDepartment of Health Sciences, University of Leicester, University Road, Leicester, UK.
T R GauntMRC Integrative Epidemiology Unit at the University of Bristol, University of Bristol, Oakfield House, Oakfield Grove, Bristol, UK.
T KacprowskiDepartment of Functional Genomics, Interfaculty Institute for Genetics and Functional Genomics, University of Greifswald, Greifswald, Germany.
J YangRush Alzheimer's Disease Center and Department of Neurological Sciences, Rush University Medical Center, Chicago, IL, USA.
P L De JagerCenter for Translational and Systems Neuroimmunology, Department of Neurology, Columbia University Medical Center, New York, NY, USA.
L YuRush Alzheimer's Disease Center and Department of Neurological Sciences, Rush University Medical Center, Chicago, IL, USA.
A BergmanDepartment of Systems and Computational Biology, Albert Einstein College of Medicine, Bronx, NY, USA.
R XiaInstitute of Molecular Medicine, The University of Texas Health Science Center at Houston, Houston, TX, USA.
M FornageInstitute of Molecular Medicine, The University of Texas Health Science Center at Houston, Houston, TX, USA.
M F FeitosaDivision of Statistical Genomics, Department of Genetics, Washington University School of Medicine, St. Louis, USA.
M K WojczynskiDivision of Statistical Genomics, Department of Genetics, Washington University School of Medicine, St. Louis, USA.
A T KrajaDivision of Statistical Genomics, Department of Genetics, Washington University School of Medicine, St. Louis, USA.
M A ProvinceDivision of Statistical Genomics, Department of Genetics, Washington University School of Medicine, St. Louis, USA.
N AminDepartment of Epidemiology, Erasmus Medical Center, Rotterdam, The Netherlands.
F RivadeneiraDepartment of Internal Medicine, Erasmus Medical Center, Rotterdam, The Netherlands.
H TiemeierDepartment of Epidemiology, Erasmus Medical Center, Rotterdam, The Netherlands.
A G UitterlindenDepartment of Epidemiology, Erasmus Medical Center, Rotterdam, The Netherlands.
L BroerDepartment of Internal Medicine, Erasmus Medical Center, Rotterdam, The Netherlands.
J B J Van MeursDepartment of Epidemiology, Erasmus Medical Center, Rotterdam, The Netherlands.
C M Van DuijnDepartment of Epidemiology, Erasmus Medical Center, Rotterdam, The Netherlands.
L M RaffieldDepartment of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
L LangeDepartment of Medicine, University of Colorado Denver, Anschutz Medical Campus, Aurora, CO, USA.
S S RichCenter for Public Health Genomics, University of Virginia, Charlottesville, VA, USA.
R N LemaitreCardiovascular Health Research Unit, Department of Medicine, University of Washington, Seattle, WA, USA.
M O GoodarziDivision of Endocrinology, Diabetes and Metabolism, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
C M SitlaniCardiovascular Health Research Unit, Department of Medicine, University of Washington, Seattle, WA, USA.
A C Y MakCardiovascular Research Institute and Institute for Human Genetics, University of California, San Francisco, CA, USA.
D A BennettRush Alzheimer's Disease Center and Department of Neurological Sciences, Rush University Medical Center, Chicago, IL, USA.
S RodriguezMRC Integrative Epidemiology Unit at the University of Bristol, University of Bristol, Oakfield House, Oakfield Grove, Bristol, UK.
J M MurabitoBoston University School of Medicine, Boston University, Boston, MA, USA.
K L LunettaDepartment of Biostatistics, Boston University School of Public Health, Boston, MA, USA.
N SotoodehniaCardiovascular Health Research Unit, Division of Cardiology, University of Washington, Seattle, WA, USA.
G AtzmonDepartment of Natural Science, University of Haifa, Haifa, Israel.
K YeDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine, Bronx, NY, 10461, USA.
N BarzilaiDepartments of Medicine and Genetics, Albert Einstein College of Medicine, Bronx, NY, 10461, USA.
J A BrodyCardiovascular Health Research Unit, Department of Medicine, University of Washington, Seattle, WA, USA.
B M PsatyCardiovascular Health Research Unit, Departments of Epidemiology, Medicine and Health Services, University of Washington, Seattle, WA, USA.
K D TaylorThe Institute for Translational Genomics and Population Sciences, Department of Pediatrics, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA, USA.
J I RotterThe Institute for Translational Genomics and Population Sciences, Department of Pediatrics, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA, USA.
E BoerwinkleDepartment of Epidemiology, Human Genetics, and Environmental Sciences, School of Public Health, Human Genetics Center, The University of Texas Health Science Center at Houston, Houston, TX, USA.
N PankratzDepartment of Laboratory Medicine and Pathology, University of Minnesota Medical School, Minneapolis, MN, USA.
D E ArkingDepartment of Genetic Medicine, McKusick-Nathans Institute, Johns Hopkins University School of Medicine, Baltimore, MD, USA. arking@jhmi.edu.
Erasmus MC · NLUniversity of Washington · USBoston University · USAlbert Einstein College of Medicine · USJohns Hopkins University · USRush University Medical Center · USThe University of Texas Health Science Center at Houston · USUniversity of Bristol · GBUCLA Medical Center · USUniversity of Minnesota Medical Center · USBaylor College of Medicine · USBroad Institute · USCedars-Sinai Medical Center · USMedizinische Hochschule Hannover · DEUniversity of California, San Francisco · USUniversity of Colorado Anschutz Medical Campus · USUniversity of Leicester · GBUniversity of North Carolina at Chapel Hill · USUniversity of Virginia · USWestern University · CA

Funding

CHARGE Consortium: Omics Discovery for CVD and Aging PhenotypesR01HL105756 · NHLBI · UNIVERSITY OF WASHINGTON · PI Bruce M Psaty, NICHOLAS L SMITH · 2011 to 2026
$9.5M
Mitochondrial DNA Copy Number and Genetic Variation in Coronary Heart DiseaseR01HL131573 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI ARKING, DAN E · 2016 to 2019
$3.2M
Mitochondrial DNA heteroplasmy and risk for atherosclerotic cardiovascular disease (ASCVD)R01HL144569 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI ARKING, DAN E · 2019 to 2022
$3.1M
Mitochondrial DNA Copy Number and Sequence Variation in Relation to Age, Alzheimer's Disease Related Phenotypes and Age-related Metabolic TraitsR01AG059727 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI LIU, CHUNYU, SATIZABAL, CLAUDIA L · 2018 to 2021
$2.6M
Mitochondrial DNA, Nuclear DNA Methylation, and Cardiometabolic Disease TraitsR01HL155569 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI LIU, CHUNYU · 2021 to 2024
$2.4M
Medical Research Council G9815508Medical Research Council MC_PC_15018Medical Research Council MC_PC_17228Medical Research Council MC_PC_19009Medical Research Council MC_QA137853Medical Research Council MC_UU_00011/4Medical Research Council MR/K002767/1NHLBI NIH HHS R01 HL105756NHLBI NIH HHS R01 HL131573NHLBI NIH HHS R01HL13573NHLBI NIH HHS R01 HL144569NHLBI NIH HHS R01HL144569NHLBI NIH HHS R01 HL155569NIA NIH HHS R01 AG059727
6 · The paper itself

Abstract

Mitochondrial DNA copy number (mtDNA-CN) measured from blood specimens is a minimally invasive marker of mitochondrial function that exhibits both inter-individual and intercellular variation. To identify genes involved in regulating mitochondrial function, we performed a genome-wide association study (GWAS) in 465,809 White individuals from the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) consortium and the UK Biobank (UKB). We identified 133 SNPs with statistically significant, independent effects associated with mtDNA-CN across 100 loci. A combination of fine-mapping, variant annotation, and co-localization analyses was used to prioritize genes within each of the 133 independent sites. Putative causal genes were enriched for known mitochondrial DNA depletion syndromes (p = 3.09 × 10

Indexed as

DNA Copy Number VariationsDNA, MitochondrialPlatelet ActivationPolymorphism, Single NucleotideAgedCell ProliferationFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMaleMegakaryocytesMiddle AgedMitochondriaNucleotidesPhenotypeDNA, MitochondrialNucleotides

Identifiers

PMID34859289
PMCPMC8758627
OpenAlexW3215719803

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.