Evidence map›Paper›PMID 34859104›Full record

ArticleBioMed research international2021

Analysis of the Expression and Prognostic Value of MSH2 in Pan-Cancer Based on Bioinformatics.

Wenli Qiu, Ke Ding, Lusheng Liao, Yongchang Ling, Xiaoqiong Luo, Junli Wang

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Wenli QiuMedical Reproduction Center, Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, Guangxi, China.ORCID https://orcid.org/0000-0002-5730-3024
Ke DingDepartment of Sports Medicine, Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, Guangxi, China.ORCID https://orcid.org/0000-0001-7869-4143
Lusheng LiaoSchool of Medical Laboratory Science, Youjiang Medical University for Nationalities, Baise, Guangxi, China.
Yongchang LingDepartment of Obstetrics, Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, Guangxi, China.
Xiaoqiong LuoMedical Reproduction Center, Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, Guangxi, China.
Junli WangMedical Reproduction Center, Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, Guangxi, China.ORCID https://orcid.org/0000-0003-2636-7591
Affiliated Hospital of Youjiang Medical University for Nationalities · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMutS homolog 2 (MSH2), with the function of identifying mismatches and participating in DNA repair, is the "housekeeping gene" in the mismatch repair (MMR) system. MSH2 deficiency has been reported to enhance cancer susceptibility for the association of hereditary nonpolyposis colorectal cancer. However, the expression and prognostic significance of MSH2 have not been studied from the perspective of pan-cancer.

methodsThe GTEx database was used to analyze the expression of MSH2 in normal tissues. The TCGA database was used to analyze the differential expression of MSH2 in pan-cancers. The prognostic value of MSH2 in pan-cancer was assessed using Cox regression and Kaplan-Meier analysis. Spearman correlations were used to measure the relationship between the expression level of MSH2 in pan-cancer and the level of immune infiltration, tumor mutational burden (TMB), and microsatellite instability (MSI).

resultsMSH2 is highly expressed in most type of cancers and significantly correlated with prognosis. In COAD, KIRC, LIHC, and SKCM, the expression of MSH2 was significantly positively correlated with the abundance of B cells, CD4+ T cells, CD8+ T cells, dendritic cells, macrophages, and neutrophils. In THCA, MSH2 expression correlated with CD8+T Cell showed a significant negative correlation. MSH2 had significantly negative correlations with stromal score and immune score in a variety of cancers and significantly correlated with TMB and MSI of a variety of tumors.

conclusionsMSH2 may play an important role in the occurrence, development, and immune infiltration of cancer. MSH2 can emerge as a potential biomarker for cancer diagnosis and prognosis.

Indexed as

Biomarkers, TumorComputational BiologyDatabases, GeneticFemaleGene Expression Regulation, NeoplasticGenetic Association StudiesHumansLymphocytes, Tumor-InfiltratingMaleMicrosatellite InstabilityMutationMutS Homolog 2 ProteinNeoplasmsPrognosisTumor MicroenvironmentBiomarkers, TumorMSH2 protein, humanMutS Homolog 2 Protein

Identifiers

PMID34859104
PMCPMC8632401
OpenAlexW3216391393

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.